FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 52/99 (52.53%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 KRAL PL+ IA NAG GSV+ +V SD GYNAATG +EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE E + A PA M G Sbjct: 443 KRALEAPLRQIADNAGAEGSVIVSRVKDSD-FNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKSAAPADAGMGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 307 AL PL IA+NAG NG+VV+E V S + GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 446 ALTAPLMRIAENAGANGAVVAENVKSRAISE-GYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.710e-18 Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 444 KRAIEEPLRQIVANAGKEGAVVVQKVREGKGD-FGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.233e-18 Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 444 KRAIEEPLREIVANAGKEGAVVVQKVREGKGD-FGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.917e-18 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 KRAL PL+ IA+NAG + VV+ V +D YG+NAA+G Y D+ AGIIDP KV R L++A SVA L ++ V EIKE +PAMP PM + G Sbjct: 441 KRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEIKEDKPAMP---PMPDMG 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.975e-18 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 KRA+ PLK IA+NAG + VV+ V + N +G+NAA G Y D+ A GIIDP KV R L++A SV+ L ++ + EIKE +PAMP + M G Sbjct: 442 KRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSVSSLLLTTEATISEIKEDKPAMPDMSGMGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +RAL PL+ IA N G S+V KV S + +G+NAATG+YEDL+ +G+IDPTKV R L++ASSVA L + +V E + E A PAG M G Sbjct: 443 RRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSVASLMLTTMALVAEKPKEESAAPAGGGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 277 RAL P++ IA+NAG +GS+V +KV + + G+NA TG YEDL+AAG+IDP V R L++A+S+A + +D VV E +E +PAMP G Sbjct: 445 RALEEPIRQIAENAGADGSIVVDKVRAQGD-SIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 +AL PL IA+NAG+ G+V+ KV G+NA T Y D++ GI+DP+KV R L++A+SVA TFL ++ V IKEP PAMPAG P Sbjct: 444 KALEAPLSCIAQNAGLEGAVIVNKVREKKTG-VGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEAAVASIKEPAPAMPAGGP 535
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 RA+ PLK IA NAG + VV+ +V S N G+NAATG Y D+ AGI+DP KV R +++A SVA L ++ V +IKE +PAMP+ M G Sbjct: 442 RAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVSDIKEDKPAMPSMPDMGGMG 539 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |