FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_ROSDO (60 kDa chaperonin 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 ++AL PL+ IA+NAGV+GSVV+ K+ SD+ K+G+NA T Y D+ A G+IDP KVVR L+ A+S+A + ++ +V + E A P G D G G Sbjct: 444 RKALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFNAQTEEYGDMFAFGVIDPAKVVRTALQDAASIAGLLITTEAMVADRPAKEGAAPGGGMPDMGGMG 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 271 ++AL PL+ IA+NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV + ++ +V E EP+PA P Sbjct: 444 RKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 301 RAL PLK IA+NAG NG+V+SE+V + GYNAA+ Y D++AAGI+DP KV R L++A+S+A L ++C+VV+ E E A PAG P + Y Sbjct: 445 RALPAPLKRIAENAGQNGAVISERVKEKE-FNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 +RA+ PL+ IA+NAGV+G+VV+EKV S +GYNAAT +YEDL+A G+IDP KVVR + +A+SVA L ++ +V E + E A G P G G Sbjct: 443 RRAVEAPLRQIAQNAGVDGTVVAEKVRSGAP-TFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAEKPKKEKAAAGGAPGGMGGMG 542
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_RHOSH (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides GN=groL1 PE=1 SV=4) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 +RAL PL+ IA+NAGV+GSVV+ KV S+ +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ + +PEP PAG P Sbjct: 444 RRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIAD--KPEPKSPAGGP 535
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_RHOS4 (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 +RAL PL+ IA+NAGV+GSVV+ KV S+ +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ + +PEP PAG P Sbjct: 444 RRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIAD--KPEPKSPAGGP 535
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 298 +AL P++ IA+NAGV GS+V K+L + + +G++A T +Y D++A GI+DP KVVR L+ ASSVA + ++ +V E+ KE PAMP G M G Sbjct: 445 KALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEDYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTEAMVAELPKEAAPAMPGGGGMGGMG 543
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_WOLRE (60 kDa chaperonin OS=Wolinella recta GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNPMDNSG 298 +RAL PL+ IA+NAG + VV+ V S + YG+NAATG Y D+ AGIIDP KV R L++A SVA L ++ + E+KE P PAMP + M G Sbjct: 441 RRALTAPLRQIAENAGFDAGVVANSVSVSKDDNYGFNAATGEYVDMFKAGIIDPVKVERIALQNAVSVASLLLTTEATISELKEDKPMPAMPDMSGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_SPHWW (60 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 304 +RA+ P+K IA+NAG +G+VV+ +L ++ G+NAAT YE+L+AAG+IDPTKVVR L+ A+SVA + ++ + E+ E + PAMP G G G Sbjct: 444 RRAISAPVKQIAQNAGQDGAVVAGNLLRENDETKGFNAATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEATIAELPEDKAPAMPGGGMGGMGGMG 545
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_PARDP (60 kDa chaperonin OS=Paracoccus denitrificans (strain Pd 1222) GN=groL1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 +RAL P++ IA+NAGV+G+VV+ KV S + +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ E +PEP PAG D G G Sbjct: 444 RRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAE--KPEPKAPAGGMPDMGGMG 542 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |