FC873509

Overview
NameFC873509
Unique NameFC873509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9430 contig Ccv1_Contig9430:40..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEAB (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fbp PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.214e-22
Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+       +G    +ASEE D P  +   Y  G Y++VFDPLDGSSNID  VS G+IF +
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSV 132          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_AZOSE (Fructose-1,6-bisphosphatase class 1 OS=Azoarcus sp. (strain EbN1) GN=fbp PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.214e-22
Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEE-EDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIF-------GIYSPNDECLADIG 670
            TLT +L++Q+++G    +L +++  ++ A K IA  V + A+++L G  G  NVQGE QKKLDV++NE+        G    +ASEE E+V     +   G Y+++FDPLDGSSNID  +S G+IF       GI  PN++C    G
Sbjct:    5 TLTQFLIEQQRAGRTSPDLRLLIEVVARAVKAIAVNVSKGALADLLGEAGTDNVQGEAQKKLDVIANEILLQANEWGGHLAAMASEEVEEVHQIPFDYPKGGYLLLFDPLDGSSNIDVNISVGTIFSVLRFPEGIQEPNEQCFLQPG 151          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEU5 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas stutzeri (strain A1501) GN=fbp PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.777e-22
Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK I+  V + A+  + G  G+ NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    D C +
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKAISHQVSKGALGGVLGSAGSENVQGEVQKKLDVLSNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPDACFS 141          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_POLSJ (Fructose-1,6-bisphosphatase class 1 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=fbp PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.933e-22
Identity = 57/135 (42.22%), Postives = 83/135 (61.48%), Query Frame = 2
Query:  254 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE 652
            +LT +L++Q++  G I A+L ++L  ++ ACK I+  V + A+  + G  G+ NVQGE QKKLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +    D+
Sbjct:    6 SLTRYLVEQQRREGHIPAQLRLLLEVVARACKGISQSVNKGALGGVLGTAGSENVQGEVQKKLDIIANEVLIEANEWGGHLAAMASEEMDSIYLVPNRYPQGEYLLLFDPLDGSSNIDVNVSIGTIFSVLKKPDD 140          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_HALHL (Fructose-1,6-bisphosphatase class 1 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=fbp PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.933e-22
Identity = 57/129 (44.19%), Postives = 82/129 (63.57%), Query Frame = 2
Query:  254 TLTNWLLKQEQS-GVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGR-TGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            TLTN++++ +++      E T +L+ IS ACK+IA LV +  +  + G   + NVQGE QKKLDVV+NEVF   L  +G   G+++ E +D+      S  G Y+++ DPLDGSSNID  VS G+IF I
Sbjct:    6 TLTNYIIETQRNLPEATGEFTGLLNDISVACKRIADLVNKGDLVGMLGSADSENVQGETQKKLDVVTNEVFIEALTQNGHIAGLVSEEMDDIYTLPNPSQRGRYLLLCDPLDGSSNIDVNVSVGTIFSI 134          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16A1_LEPCP (Fructose-1,6-bisphosphatase class 1 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.933e-22
Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 2
Query:  254 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            +LT +L++Q+ Q G I A+L +++  ++ ACK+IA  V + A+  + G  G+ NVQGE QKKLD++SNEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +
Sbjct:    6 SLTQFLVEQQRQHGRIPAQLRLLIEVVARACKRIAISVNKGALGEVLGSAGSENVQGEVQKKLDIISNEVLIEANEWGGHLAAMASEEMDSIHVVPNRYPQGEYMLLFDPLDGSSNIDVNVSIGTIFSV 134          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_AZOVD (Fructose-1,6-bisphosphatase class 1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=fbp PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.442e-22
Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECL 658
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    D+ L
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWGGHLAGMASEEMDSAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPDQYL 140          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_MAGSA (Fructose-1,6-bisphosphatase class 1 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=fbp PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22
Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = 2
Query:  242 YEIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            Y+  TLT++LL++++        T +++ I  ACK I+  V R A++   G+ G+ NVQGE+QKKLDV++N++F +     G    +ASEE +   AV  +  G Y+++FDPLDGSSNID  +S GSIF I
Sbjct:    3 YKRITLTHFLLQEQRRLGGSGSFTALMTDIIFACKMISHEVNRGALAGNLGVAGSENVQGEEQKKLDVLANDIFLHMNALGGSYAGMASEELEDVHAVHGAADGKYLLLFDPLDGSSNIDVNISVGSIFSI 133          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16A1_POLNA (Fructose-1,6-bisphosphatase class 1 1 OS=Polaromonas naphthalenivorans (strain CJ2) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22
Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = 2
Query:  254 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE 652
            +LT +L++Q++  G I  EL +++  ++ ACK I+  V + A+ ++ G  G+ NVQGE QKKLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +   +++
Sbjct:    6 SLTRYLVEQQRIDGHIPPELRLLIEVVARACKSISQAVNKGALGDVMGSAGSENVQGEIQKKLDIIANEVLIEANEWGGHLAAMASEEMDDIYVVPNRYPQGEYLLMFDPLDGSSNIDVNVSIGTIFSVLKKSED 140          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_VEREI (Fructose-1,6-bisphosphatase class 1 OS=Verminephrobacter eiseniae (strain EF01-2) GN=fbp PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.099e-21
Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 2
Query:  254 TLTNWLLKQEQSG-VIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPND 649
            +LT +L++Q+++G +I A+L ++L  ++ ACK I+  V + A+ ++ G  G+ NVQGE QKKLD+++N V        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +    D
Sbjct:    6 SLTRYLVEQQRAGGLIPAQLRLLLEVVARACKSISHAVSKGALGDVLGTAGSENVQGEVQKKLDIIANGVLIEANEWGGHLAAMASEEMDGIYLVPHRYPQGEYLLLFDPLDGSSNIDVNVSIGTIFSVLRKPD 139          
The following BLAST results are available for this feature:
BLAST of FC873509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
F16PA_PSEAB2.214e-2243.75Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_AZOSE2.214e-2240.14Fructose-1,6-bisphosphatase class 1 OS=Azoarcus sp... [more]
F16PA_PSEU53.777e-2241.61Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_POLSJ4.933e-2242.22Fructose-1,6-bisphosphatase class 1 OS=Polaromonas... [more]
F16PA_HALHL4.933e-2244.19Fructose-1,6-bisphosphatase class 1 OS=Halorhodosp... [more]
F16A1_LEPCP4.933e-2244.96Fructose-1,6-bisphosphatase class 1 1 OS=Leptothri... [more]
F16PA_AZOVD6.442e-2241.91Fructose-1,6-bisphosphatase class 1 OS=Azotobacter... [more]
F16PA_MAGSA8.414e-2242.75Fructose-1,6-bisphosphatase class 1 OS=Magnetospir... [more]
F16A1_POLNA8.414e-2240.74Fructose-1,6-bisphosphatase class 1 1 OS=Polaromon... [more]
F16PA_VEREI1.099e-2141.79Fructose-1,6-bisphosphatase class 1 OS=Verminephro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BC10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873509 ID=FC873509; Name=FC873509; organism=Citrus clementina; type=EST; length=843bp
CAGAAAGCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCAC
AGCTTCTCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAA
ATATGTGTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGT
TTTGAAGAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTG
TTGGGACAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATT
GAAACGCTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGA
TGCTGAGCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGA
TTGCTTCTTTGGTGCAAAGAGCTGCCATTTCCAACTTGACTGGAATTCAG
GGTGCTGTCAATGTTCAAGGCGAGGACCAGAAGAAGCTCGACGTCGTTTC
AAATGAGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTA
TAGCGTCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCT
GGAAACTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGA
TGCTGCAGTGTCTACTGGATCCATCTTTGGCATATACAGCCCAAATGATG
AGTGTCTTGCCGATATTGGTGATGATCCTACTGTGAGTTTCATGCTTCTG
TCATTTCATTGTAATACTAAACAGAAAAATGAAGTCTGATAGTAAATTAC
TTCCATTTTTTTCAATTTTGATACATTGCAGCTGGGCAACACTGAACTAA
GGTGTGTAGTGAACGTGTGCCAGCCAGGAAGCAACCTTCTTGC
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