FC873509

Overview
NameFC873509
Unique NameFC873509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9430 contig Ccv1_Contig9430:40..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PROA2 (Fructose-1,6-bisphosphatase class 1 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=fbp PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21
Identity = 56/139 (40.29%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  263 NWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIY--SPNDECLADIGD 673
            ++L +Q+       ELT +L+ ++ A K +   V RA ++++ G+ G  NVQGE+ KKLD+ +NE   N +   GR  ++ SEE +  +    + +G YI++FDPLDGSSNID  VS G+IF IY  + +D   ADI D
Sbjct:   10 HFLEQQKSHPEATGELTDLLNDVAFAAKLVRREVVRAGLADILGMAGTTNVQGEEVKKLDLFANEKIINAIGEHGRFALMGSEENEGTIIPPNNDTGRYILLFDPLDGSSNIDVNVSVGTIFSIYRLTGDDPKEADIND 148          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_CHRVO (Fructose-1,6-bisphosphatase class 1 OS=Chromobacterium violaceum GN=fbp PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21
Identity = 51/129 (39.53%), Postives = 84/129 (65.12%), Query Frame = 2
Query:  254 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            TL+ +L++Q++ +G +  EL +++ ++  ACK I+  V + A++++ G  G  N+QGE QKKLDV++N+   +     G    +ASEE ++P  +   Y  G Y+++FDPLDGSSNID  +S G+IF I
Sbjct:    5 TLSRFLIEQQRKAGTLPPELRLLIETVGRACKAISYSVNKGALADVLGEAGTGNIQGEAQKKLDVIANDFLLDANEWGGSLAAMASEEMELPYHIPGEYPKGEYLLMFDPLDGSSNIDVNISVGTIFSI 133          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_ACIAC (Fructose-1,6-bisphosphatase class 1 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 2
Query:  254 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            +LT +L++Q++  G+I ++L ++L  ++ ACK I+  V + A+  + G   + NVQGE QKKLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +
Sbjct:    6 SLTRYLVEQQRVDGLIPSQLRLLLEVVARACKHISHAVNKGALGGVLGSASSENVQGEIQKKLDIIANEVLIEANEWGGHLAAMASEEMDSIYVVPNRYPQGEYLLLFDPLDGSSNIDVNVSIGTIFSV 134          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_METI4 (Fructose-1,6-bisphosphatase class 1 OS=Methylacidiphilum infernorum (isolate V4) GN=fbp PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.176e-21
Identity = 51/133 (38.35%), Postives = 84/133 (63.16%), Query Frame = 2
Query:  239 SYEIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSN-CLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            SY   TL+ +LL+Q + GVID +L  +++ I +ACK +A+ V +  + +   +   +NVQGE+QK LDV++NE+F   C +     G+++ E E   +   E   G Y++++DPLDGSSN+D  ++ GSIF +
Sbjct:    2 SYHRMTLSKFLLEQRKKGVIDPDLGSLINDIESACKYVAAAVSKGKLISQE-VNVTINVQGEEQKPLDVIANEIFLKICEQGDQLQGMVSEEMESPYIIPPEHRRGKYLLIYDPLDGSSNLDVNLTVGSIFSV 133          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_STRMK (Fructose-1,6-bisphosphatase class 1 OS=Stenotrophomonas maltophilia (strain K279a) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            +LT +L++++ +G I+A+L  +++ ++ AC  I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G     ASEE D    V + Y  G+++++FDPLDGSSNID  VS G+IF +
Sbjct:    5 SLTRFLIQEQHAGRINADLRQLIAVVARACTSISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVISNEILLEANAWGGHLAACASEEMDHSQPVPDIYPRGDFLLLFDPLDGSSNIDVNVSVGTIFSV 132          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_STRM5 (Fructose-1,6-bisphosphatase class 1 OS=Stenotrophomonas maltophilia (strain R551-3) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            +LT +L++++ +G I+A+L  +++ ++ AC  I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G     ASEE D    V + Y  G+++++FDPLDGSSNID  VS G+IF +
Sbjct:    5 SLTRFLIQEQHAGRINADLRQLIAVVARACTSISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVISNEILLEANAWGGHLAACASEEMDHSQPVPDIYPRGDFLLLFDPLDGSSNIDVNVSVGTIFSV 132          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEU2 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSESM (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas syringae pv. tomato GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEFS (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas fluorescens (strain SBW25) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEF5 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141          
The following BLAST results are available for this feature:
BLAST of FC873509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
F16PA_PROA23.197e-2140.29Fructose-1,6-bisphosphatase class 1 OS=Prosthecoch... [more]
F16PA_CHRVO3.197e-2139.53Fructose-1,6-bisphosphatase class 1 OS=Chromobacte... [more]
F16PA_ACIAC3.197e-2141.86Fructose-1,6-bisphosphatase class 1 OS=Acidovorax ... [more]
F16PA_METI44.176e-2138.35Fructose-1,6-bisphosphatase class 1 OS=Methylacidi... [more]
F16PA_STRMK5.454e-2141.41Fructose-1,6-bisphosphatase class 1 OS=Stenotropho... [more]
F16PA_STRM55.454e-2141.41Fructose-1,6-bisphosphatase class 1 OS=Stenotropho... [more]
F16PA_PSEU25.454e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSESM5.454e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEFS5.454e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEF55.454e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BC10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873509 ID=FC873509; Name=FC873509; organism=Citrus clementina; type=EST; length=843bp
CAGAAAGCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCAC
AGCTTCTCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAA
ATATGTGTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGT
TTTGAAGAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTG
TTGGGACAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATT
GAAACGCTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGA
TGCTGAGCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGA
TTGCTTCTTTGGTGCAAAGAGCTGCCATTTCCAACTTGACTGGAATTCAG
GGTGCTGTCAATGTTCAAGGCGAGGACCAGAAGAAGCTCGACGTCGTTTC
AAATGAGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTA
TAGCGTCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCT
GGAAACTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGA
TGCTGCAGTGTCTACTGGATCCATCTTTGGCATATACAGCCCAAATGATG
AGTGTCTTGCCGATATTGGTGATGATCCTACTGTGAGTTTCATGCTTCTG
TCATTTCATTGTAATACTAAACAGAAAAATGAAGTCTGATAGTAAATTAC
TTCCATTTTTTTCAATTTTGATACATTGCAGCTGGGCAACACTGAACTAA
GGTGTGTAGTGAACGTGTGCCAGCCAGGAAGCAACCTTCTTGC
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