FC873509

Overview
NameFC873509
Unique NameFC873509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9430 contig Ccv1_Contig9430:40..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSE14 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_AZOSB (Fructose-1,6-bisphosphatase class 1 OS=Azoarcus sp. (strain BH72) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 51/128 (39.84%), Postives = 81/128 (63.28%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGI 634
            TLT +L++Q+++G + A+L +++  ++ A K I+  V + A++ + G  G  NVQGE QKKLDV++NE+        G    +ASEE +    +   Y  G Y+++FDPLDGSSNID  +S G+IF +
Sbjct:    5 TLTQFLIEQQRAGRVSADLRLLIEVVARAVKAISVNVSKGALAGVLGEAGTDNVQGEAQKKLDVIANEILLQANEWGGHLAAMASEEVETVHQIPFDYPKGGYLLLFDPLDGSSNIDVNISVGTIFSV 132          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_CHLCH (Fructose-1,6-bisphosphatase class 1 OS=Chlorobium chlorochromatii (strain CaD3) GN=fbp PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 52/125 (41.60%), Postives = 79/125 (63.20%), Query Frame = 2
Query:  305 ELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIY--SPNDECLADIGD 673
            ELT +L+ ++ A K +   V RA + ++ G+ G+ NVQGE+ KKLD+ +NE   + + + GR  ++ SEE +  +    + SGNY+++FDPLDGSSNID  VS G+IF IY    +D   A + D
Sbjct:   24 ELTDLLTDVAFAAKLVRREVVRAGLVDILGLAGSTNVQGEEVKKLDLFANEQIISAIGAHGRFAVMGSEENEEIIIPTNNESGNYVLLFDPLDGSSNIDVNVSVGTIFSIYKLKTSDPAKASLAD 148          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEPF (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLA 661
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID     G+IF +    +E L+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVLSNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLS 141          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PSEMY (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas mendocina (strain ymp) GN=fbp PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE--CLADIGDD 676
            TL+ +L++Q +S    A+L  ++  ++ ACK I+  V + A+  + G   + NVQGE QKKLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    D      D+G+D
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKAISHQVSKGALGGVLGSLDSENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPDRNGDTGDLGED 148          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_CHLL2 (Fructose-1,6-bisphosphatase class 1 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=fbp PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = 2
Query:  305 ELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDP 679
            ELT +L+ ++ A K +   V RA + ++ G  G  NVQGE+ KKLD+ +NE   N +   GR  ++ SEE D  +   ++ +GNY ++FDPLDGSSNID  VS G+IF IY          GDDP
Sbjct:   23 ELTDLLTDVAFAAKLVRREVVRAGLVDILGFAGTTNVQGEEVKKLDLFANEKIINAIGQHGRFAVMGSEENDGIIIPPKNETGNYALLFDPLDGSSNIDVNVSVGTIFSIYRLK-------GDDP 140          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16P_KLULA (Fructose-1,6-bisphosphatase OS=Kluyveromyces lactis GN=FBP1 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20
Identity = 53/146 (36.30%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  245 EIETLTNWLLKQEQSGVIDA--ELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDD 676
            +I TL+ ++L Q+     +A  E +++L+S+  A K I+  ++RA + NL G+ GA N  G+ QKKLDV+ +E+F N +++SG   ++ SEE++  +    S  G Y V  DP+DGSSN+DA VS G+I  ++  ++    + G++
Sbjct:   17 DIITLSRFILDQQHLSAKNATGEFSMLLNSLQFAFKFISQTIRRAELVNLIGLAGASNSTGDQQKKLDVLGDEIFINAMKASGNVKVLVSEEQEDLIVFRNS-PGKYAVCCDPIDGSSNLDAGVSVGTIVSLFKIHENQNGNSGEE 161          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_SODGM (Fructose-1,6-bisphosphatase class 1 OS=Sodalis glossinidius (strain morsitans) GN=fbp PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 2
Query:  248 IETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIY 637
            ++TL  +++ KQ        ELT +LS+I    K I   + +A + ++ G  GA NVQGE Q KLD+ +NE     L++ G+   IASEEED  V  E   +G Y+V+ DPLDGSSNID  VS G+IF IY
Sbjct:    1 MKTLGEFIVEKQHDFPHATGELTALLSAIKLGAKIIHRDINKAGLVDILGTSGAENVQGEVQMKLDLFANEKLKAALKARGQVAGIASEEEDEIVVFEGVENGKYVVLMDPLDGSSNIDVNVSVGTIFSIY 131          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_PROVI (Fructose-1,6-bisphosphatase class 1 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=fbp PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20
Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 2
Query:  254 TLTNWLLKQEQS-GVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIY--SPNDECLADIGD 673
            T+   +L+Q+++      ELT +LS ++ A K +   V RA + ++ G  G+ NVQGE+ KKLD+ +N+   N +   GR  I+ SEE +  +    + +G+Y ++FDPLDGSSNID  VS G+IF IY    +D   ADI D
Sbjct:    6 TIERHILEQQKNFPEATGELTDLLSDVAFAAKLVRREVVRAGLVDILGFAGSTNVQGEEVKKLDLFANDKIINAIGQHGRFAIMGSEENEEIITPPNNENGSYALLFDPLDGSSNIDVNVSVGTIFSIYKIKNSDPRKADISD 148          
BLAST of FC873509 vs. ExPASy Swiss-Prot
Match: F16PA_CHLPB (Fructose-1,6-bisphosphatase class 1 OS=Chlorobium phaeobacteroides (strain BS1) GN=fbp PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.215e-20
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 2
Query:  305 ELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIY--SPNDECLADIGD 673
            ELT +L  ++ A K +   V RA + ++ G+ G  NVQGE+ KKLD+ +N+   N +   GR  ++ SEE +  +   ++ SG Y+++FDPLDGSSNID  VS G+IF IY  + +D   ADI D
Sbjct:   24 ELTDLLYDVAFAAKLVRREVVRAGLVDILGMAGTTNVQGEEVKKLDLFANDKIINAIGQHGRFALMGSEENEGTIIPPKNESGKYVLLFDPLDGSSNIDVNVSVGTIFSIYRLTGDDPSKADIND 148          
The following BLAST results are available for this feature:
BLAST of FC873509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
F16PA_PSE145.454e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_AZOSB5.454e-2139.84Fructose-1,6-bisphosphatase class 1 OS=Azoarcus sp... [more]
F16PA_CHLCH7.123e-2141.60Fructose-1,6-bisphosphatase class 1 OS=Chlorobium ... [more]
F16PA_PSEPF9.303e-2140.15Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEMY9.303e-2140.28Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_CHLL29.303e-2143.20Fructose-1,6-bisphosphatase class 1 OS=Chlorobium ... [more]
F16P_KLULA1.215e-2036.30Fructose-1,6-bisphosphatase OS=Kluyveromyces lacti... [more]
F16PA_SODGM1.215e-2044.27Fructose-1,6-bisphosphatase class 1 OS=Sodalis glo... [more]
F16PA_PROVI1.215e-2039.86Fructose-1,6-bisphosphatase class 1 OS=Prosthecoch... [more]
F16PA_CHLPB1.215e-2042.40Fructose-1,6-bisphosphatase class 1 OS=Chlorobium ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC10FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BC10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873509 ID=FC873509; Name=FC873509; organism=Citrus clementina; type=EST; length=843bp
CAGAAAGCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCAC
AGCTTCTCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAA
ATATGTGTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGT
TTTGAAGAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTG
TTGGGACAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATT
GAAACGCTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGA
TGCTGAGCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGA
TTGCTTCTTTGGTGCAAAGAGCTGCCATTTCCAACTTGACTGGAATTCAG
GGTGCTGTCAATGTTCAAGGCGAGGACCAGAAGAAGCTCGACGTCGTTTC
AAATGAGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTA
TAGCGTCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCT
GGAAACTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGA
TGCTGCAGTGTCTACTGGATCCATCTTTGGCATATACAGCCCAAATGATG
AGTGTCTTGCCGATATTGGTGATGATCCTACTGTGAGTTTCATGCTTCTG
TCATTTCATTGTAATACTAAACAGAAAAATGAAGTCTGATAGTAAATTAC
TTCCATTTTTTTCAATTTTGATACATTGCAGCTGGGCAACACTGAACTAA
GGTGTGTAGTGAACGTGTGCCAGCCAGGAAGCAACCTTCTTGC
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