FC873510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.259e-19 Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 3 SVEDVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 392 SVE+ + A + F+G ++ GR ++VN +++YV NLSW + L F +Q + AKV+YDR SGRSRGFGF+T+SSAE +++A+D++N V+L GR +R++VA Sbjct: 164 SVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.049e-18 Identity = 41/79 (51.90%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W DD ALET F + G+VL++K++ DRE+GRSRGFGFVT+ + + +AI+ +NG DL GR+I V+ A++R Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17 Identity = 40/79 (50.63%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W DD ALET F + G V+++K++ DRE+GRSRGFGFVT+ + + +AI+ +NG DL GR+I V+ A++R Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.222e-16 Identity = 39/79 (49.37%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L W DD +L+ F + G V+++K++ DRE+GRSRGFGFVT++S E + AI+++NG DL GR I V+ A++R Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.222e-16 Identity = 37/79 (46.84%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W D+ +LET F + G+++++K++ DRE+GRSRGFGFVT+ + + +AI+ +NG DL GR+I V+ A++R Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSR 87
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.440e-15 Identity = 37/79 (46.84%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W D LE F + G+V+++K++ DRE+GRSRGFGFVT+ + + +AID +NG +L GR I V+ A++R Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSR 85
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.456e-15 Identity = 38/79 (48.10%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W + +LE F G++L++KV+ DRE+GRSRGFGFVT+SS + +AI+++NG +L GR I V+ A++R Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.190e-15 Identity = 38/79 (48.10%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W ++ LE F G+V+++KV+ DRE+GRSRGFGFVT+SS + + +AI+++NG +L GR I V+ A++R Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSR 87
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARP 404 ++++G LSWG DD +L F G V++AKV+ DRE+GRSRGFGFV ++ AI ++G +L GR IRV+ A RP Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
BLAST of FC873510 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 165 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 401 R +VG L+W +D L+ F + G V+++K++ DRESGRSRGFGFVT+ + + +AI+ +NG +L GR I V+ A++R Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSR 85 The following BLAST results are available for this feature:
BLAST of FC873510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873510 ID=FC873510; Name=FC873510; organism=Citrus clementina; type=EST; length=808bpback to top |