FC873511

Overview
NameFC873511
Unique NameFC873511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACC1 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=dapL PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.278e-33
Identity = 85/220 (38.64%), Postives = 124/220 (56.36%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S V
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGRNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.281e-33
Identity = 83/220 (37.73%), Postives = 122/220 (55.45%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V +RR +H  PE+ F+E  T   I   +  L + +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S V
Sbjct:    7 VQIRRDLHRIPEIGFKEWETQQYILDYIGTLSLEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACWK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dapL PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.302e-33
Identity = 86/223 (38.57%), Postives = 126/223 (56.50%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V VRR +H+ PE+ F+E  T   I   LD +G +P  Y      KTG++ ++ G     ++  RAD+D LP+ E   +E+ S  +G MHACGHD+H T+ LG   L     ++++  +  +FQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S V
Sbjct:    7 VQVRRDLHKIPEIGFKEWKTQQYI---LDYIGTLPNEYLEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEYSSVHEGMMHACGHDLHATIGLGL--LTAAVSERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 83/220 (37.73%), Postives = 121/220 (55.00%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V +RR +H  PE+ F+E  T   I   +  L   +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S V
Sbjct:    7 VQIRRDLHRIPEIGFKEWKTQQYILDYIGTLSHEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 83/220 (37.73%), Postives = 121/220 (55.00%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V +RR +H  PE+ F+E  T   I   +  L   +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S V
Sbjct:    7 VQIRRDLHRIPEIGFKEWKTQQYILDYIGTLSHEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 82/220 (37.27%), Postives = 120/220 (54.55%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V++RR +H+ PEL F+E  T   I   L  L          +TGI+ ++ G+     +  RADMD LP+ E  +   +S  +G+MHACGHD+H  + LG   L H     +   +  +FQPAEEG  GA  M++   +     + I  +HI    P G+IA+  G   A TS   + + G+GGHAA PH T D ++ ASS+I+ LQ ++SR  +PL S V
Sbjct:    3 VNIRRDLHQIPELGFQEFKTQQYILDYLATLPSERLQIKTWRTGILVRVHGTAPTKTIGYRADMDGLPIDEQTDVPFRSTHEGRMHACGHDMHMAIALGV--LTHVVHHPIRDDMLFIFQPAEEGPGGALPMLESDEMKQWMPDMILALHIAPAYPVGTIATKEGLLFANTSELFIDLIGKGGHAAFPHETKDMVVAASSLIMQLQTIVSRNVNPLDSAV 220          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.775e-32
Identity = 85/225 (37.78%), Postives = 124/225 (55.11%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +++ L+S+RR +H+ PEL F+E  T A +   LD            +TG+  ++ G+    V A RADMD L + E   +  +S  +GKMHACGHD+H T+ LG     H   + ++  +  +FQPAEEG  GA  M+    L     + I  +HI    P G+IA+  G   A TS   + +EG+GGHAA PH   D ++ AS+++  LQ +ISR  DPL S V
Sbjct:    3 NREQLISIRRDLHQIPELGFKEFKTQAYLINHLDAYSKDRIEMETWRTGLFVKVKGTNPERVFAYRADMDGLSIPEDTGYPFQSVHEGKMHACGHDLHMTIALGVID--HFVHEPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDSAV 225          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.073e-32
Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+ +RR  H+ PEL F E  T  L+   +  +          KT +  ++       +A RADMD LP+ E   +   SK +G MHACGHD H T+ LG   L H    + E  +  +FQPAEEG  GA  +I+   LG    + I+ +HID  +P GSIA+  G   A TS   +  +G+GGHAA PH+  D ++  +  +  +Q +++R  DPL S V
Sbjct:    6 LIHIRRAFHQIPELGFNEFKTQKLLLDTISNMEQTRLQIKTWKTAVFVRVEGRQDYTIAYRADMDGLPITEETGYSFASKHEGAMHACGHDFHMTIALGL--LDHFASHEPECHLLFIFQPAEEGPGGAKPIIEADVLGAWQPDEIYALHIDPNLPVGSIATKPGLLFANTSELFIDFQGKGGHAAYPHTANDMVVACAHFVTQVQTVVARNIDPLDSAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31
Identity = 79/220 (35.91%), Postives = 122/220 (55.45%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            V++RR +H+ PEL F+E  T   + R +  L          KTGI  ++ G+  R ++  R D+D LP++E     + S+ +G MHACGHDVH ++ LG   L H  +  ++  +  +FQPAEEG  GA  M++   +     + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ A S++  LQ +++R  DPL S V
Sbjct:    8 VAIRRDLHKIPELGFQEFKTQQYLLRYIHALPQERLEIQTWKTGIFVKVKGTAPRKMIGYRTDIDGLPIKEETGLPYSSEHEGNMHACGHDVHMSIALGL--LTHFAEHPIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDPLDSAV 225          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BACHD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus halodurans GN=dapL PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31
Identity = 85/221 (38.46%), Postives = 120/221 (54.30%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQIGSGS-RPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMI--KEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+ VRR +H  PEL FEE+ T   +   +  L   +      KTGI+ ++G       VA RADMD LP+ E       S+ +G+MHACGHD+H T+  G   L H    + E  +  +FQPAEEG  GA  M+  +E  +   + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ AS ++  LQ ++SR  DPL S V
Sbjct:    5 LIDVRRALHRIPELGFEEYKTQTYLLDLIQSLPQDFLEVKTWKTGILVRVGGRKGEKTVAYRADMDGLPITEETGLPFVSQHEGRMHACGHDLHMTIAFGL--LRHFAYHQPETHLLFIFQPAEEGPGGAKPMLDSEEFRMWWPDEIIALHIAPEYPVGTIATRKGLLFANTSELFIDLKGQGGHAAYPHLANDMVVAASHLVTQLQSVVSRNVDPLDSAV 223          
The following BLAST results are available for this feature:
BLAST of FC873511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_BACC13.278e-3338.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC24.281e-3337.73Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACWK7.302e-3338.57Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCR1.627e-3237.73Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC41.627e-3237.73Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_ANOFW1.627e-3237.27Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
DAPL_BACP22.775e-3237.78Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACSK8.073e-3236.36Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_GEOSW1.377e-3135.91Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_BACHD1.377e-3138.46Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873511 ID=FC873511; Name=FC873511; organism=Citrus clementina; type=EST; length=788bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATG
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