FC873511

Overview
NameFC873511
Unique NameFC873511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRT1 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dapL PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.989e-30
Identity = 78/220 (35.45%), Postives = 117/220 (53.18%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKL--GIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L+ +RR +H+ PE+  EE  T A +   + ++  G  +      +TGI+  + GS     +  R D+D LP+ E    + KS  +G+MHACGHD+H T  LG    + Q + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+      G IA+ +    A T    V  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP+Q
Sbjct:    5 LIKIRRDLHQIPEIGLEEFKTQAYLLERIAEMTEGKDFVEQRTWRTGILVFLHGSAPEKTIGWRTDIDGLPIVEETGLDFKSIHEGRMHACGHDIHMTTALGLLDQMLQVQPK--NNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQ 222          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LACAC (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus acidophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.989e-30
Identity = 76/225 (33.78%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLG-------IPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDS---EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RR +HE PEL  +E  T   + + +  L        +P   P A  G+V   G   +  +  R D+DALP+QE       SK  G MHACGHD+H T+ LG      + + K    +   FQPAEE  +G     ++G        +  +G+H +  +P GSI    G   A T+  N+ V G+ GHAA P +  D ++ A+++I+ +Q +ISR  DP+QS
Sbjct:    9 LIQIRRHLHEIPELALQEKETHDYLLKVIKNLKQDHLTIVVPKTLPTAILGLVK--GINPKKTIGYRTDIDALPVQEKTGLPFTSKHSGIMHACGHDIHMTVALGLLSYFSENQPK--DNLLFFFQPAEESESGGKQAYEKGLFQGKFKPDEFYGLHDNPELPAGSIGCRMGTLFAGTTEINIDVIGKSGHAAFPQNANDTVVAAANLIMQIQTIISRSIDPIQS 229          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRGC (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=dapL PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.430e-30
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEG-TVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            + +RR +H+ PE+  EE+ T A + + ++ L     +   +T   GI+  I GS     +  R D+D LP+ E    +  S  +G+MHACGHD+H T+ LG   LL Q         +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+  G   A T    +  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP++  V
Sbjct:    5 LKIRRDLHQIPEIGLEEYKTHAYLMQVIEGLTADLDFVEIRTWRTGILVFIKGSSPYKTIGWRTDIDGLPIVEETGLDFASTHEGRMHACGHDMHMTVALG---LLEQALSAQPNHNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALIAASYFITQVQTIVSRNVDPIEGAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.430e-30
Identity = 73/223 (32.74%), Postives = 117/223 (52.47%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+ +RR +H+ PE+  EE+ TS  + + ++  G+P      K   T I+  + G      +  R D+D LP++E       SK +G+MHACGHD+H T+ LG        + K   T   +FQPAEE  +G   + + G L +   + I+ +H +  +P G+I    G   A T   +VK  G+ GHAA PH   D ++  +  +  +Q ++SR  DP+QS+V
Sbjct:    8 LIKIRRDLHQIPEIGLEEYETSDYLLKIIN--GLPQENLEIKRWKTAILVHLNGENKNYTIGYRTDIDGLPVEEKTGLPFSSKHEGRMHACGHDIHMTVALGVLSYFASHRPKYNMT--FIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDPIQSVV 226          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_BREBN (Putative N-acetyldiaminopimelate deacetylase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dapL PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.430e-30
Identity = 81/219 (36.99%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  145 VRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +RR +H+ PE  F E  T   +   L KL          +TGI+ ++ +G++P  ++A R DMD LP+ E   +  +S  +G MHACGHD+H  + LG   L H  +  +   +  LFQPAEEG  GA+ M++     +   + IF +HI    P G IA+  G   A TS   + + G+GGHAA PH   D ++  S ++  LQ +ISR  DPL S V
Sbjct:    9 IRRDLHQIPEPGFAEVKTQQYLLDYLKKLPQERIEIKTWRTGILVKL-AGTKPKRLIAWRTDMDGLPIVEETSYPFRSLHEGYMHACGHDMHMAIALGL--LTHFTEHSIADDLLFLFQPAEEGPGGAWPMMESEEFAEWRPDCIFALHIAPEYPVGQIATKPGILFANTSELYIDLVGKGGHAAFPHKANDMVVAGSHLVTQLQSIISRNIDPLDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LISIV (Putative N-acetyldiaminopimelate deacetylase OS=Listeria ivanovii GN=dapL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.556e-30
Identity = 81/228 (35.53%), Postives = 125/228 (54.82%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQIGSGSRPV--VALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            D +  +S+RR++H+ PE  ++E  T A +   ++KL  P  Y   K   TG++ ++ SG+ P   +  R D+DALP+ E      +SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S V
Sbjct:    2 DLNQFISIRRELHQIPETGYKEWKTQAYLLDYINKL--PSRYLEVKKWRTGLLVRV-SGTSPTKTIGYRTDIDALPITEETGLAFESKHAGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGQIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRSY (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 05ZYH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.289e-29
Identity = 74/223 (33.18%), Postives = 119/223 (53.36%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA---KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L++ RR +H+ PEL  EE  T A +   ++ L    ++      KTGI+  + GS     +  RAD+D LP+ E    + KS    +MHACGHD H T+ LG  + + +++ +    +  LFQPAEE  AG   M + GA GD   +  +G+H+   +  G +A+      A T    ++  G+GGHAA P++  D ++ AS  +  +Q ++SR  DP++  V
Sbjct:    4 LIATRRALHQIPELGMEEFKTHAFLMETIEGLLQDCSFAQVRTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSLHPDRMHACGHDFHMTIALGLLEKMAEQQPR--NNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRS2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 98HAH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.289e-29
Identity = 74/223 (33.18%), Postives = 119/223 (53.36%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA---KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L++ RR +H+ PEL  EE  T A +   ++ L    ++      KTGI+  + GS     +  RAD+D LP+ E    + KS    +MHACGHD H T+ LG  + + +++ +    +  LFQPAEE  AG   M + GA GD   +  +G+H+   +  G +A+      A T    ++  G+GGHAA P++  D ++ AS  +  +Q ++SR  DP++  V
Sbjct:    4 LIATRRALHQIPELGMEEFKTHAFLMETIEGLLQDCSFAQVRTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSLHPDRMHACGHDFHMTIALGLLEKMAEQQPR--NNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRP7 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain 70585) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.683e-29
Identity = 75/224 (33.48%), Postives = 118/224 (52.68%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD      +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++  V
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRP4 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.683e-29
Identity = 75/224 (33.48%), Postives = 119/224 (53.12%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++  V
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLLFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVVASYFVTQVQSVVSRNVNPIEGAV 224          
The following BLAST results are available for this feature:
BLAST of FC873511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_STRT11.989e-3035.45Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACAC1.989e-3033.78Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRGC4.430e-3034.98Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACS14.430e-3032.74Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_BREBN4.430e-3036.99Putative N-acetyldiaminopimelate deacetylase OS=Br... [more]
DAPL_LISIV7.556e-3035.53Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_STRSY1.289e-2933.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRS21.289e-2933.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP71.683e-2933.48Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP41.683e-2933.48Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873511 ID=FC873511; Name=FC873511; organism=Citrus clementina; type=EST; length=788bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATG
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