FC873511

Overview
NameFC873511
Unique NameFC873511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length788
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.397e-29
Identity = 78/222 (35.14%), Postives = 119/222 (53.60%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +++RR++H+ PE  ++E  T A +   + KL  P  +   K   TGI+  + G+     +  R D+DALP+ E  E    SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S V
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKL--PSGHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.355e-29
Identity = 74/224 (33.04%), Postives = 118/224 (52.68%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++  V
Sbjct:    4 LIQTRRALHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.355e-29
Identity = 75/223 (33.63%), Postives = 119/223 (53.36%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+ +RRQ+H+ PE+  EEH T   +   + ++    ++      +TG++  + GS  +  +  R D+D LP++EL      SK +G+MHACGHD+H T+ LG  + L + + K    +  LFQPAEE  AG   M   GA  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  +  +Q ++SR  DPL S V
Sbjct:    4 LIEIRRQLHQIPEIGLEEHKTQKYLLTIIHQIIQNKSFIQVETWQTGLLVYLKGSQGQKTIGWRTDIDGLPVEELTNLPFASK-NGRMHACGHDIHMTVALGLLEKLSESQPK--NNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.091e-28
Identity = 74/224 (33.04%), Postives = 118/224 (52.68%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHAC HD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++  V
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACVHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LACH4 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus helveticus (strain DPC 4571) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.861e-28
Identity = 72/225 (32.00%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRR-------ELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDS---EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RR +HE PEL  +E  T   + +       E   + +P   P A   ++   GS  +  +  R D+DALP++E       S   G MHACGHD+H ++ LG      + + K    +   FQPAEE  +G     ++G        +  +G+H +  +P G+I    G   A T+  N+ + G+GGHAA P +  D ++ A+S+I+ +Q +ISR  DP+QS
Sbjct:    9 LIQIRRHLHEIPELALQEKETHDYLLKIIKGFNSEFLTIKVPEELPTAILVLIK--GSNPQRTIGYRTDIDALPVEEKTNLPFSSTHPGIMHACGHDIHMSVALGLLSYFSENQPK--DNLLFFFQPAEESESGGKKAYEDGIFEGKFRPDEFYGLHDNPELPAGAIGCREGTLFAGTTEVNIDLIGKGGHAAFPQNANDTVVAAASLIMQIQTVISRSIDPIQS 229          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LACLA (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. lactis GN=dapL PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.431e-28
Identity = 75/223 (33.63%), Postives = 120/223 (53.81%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            L+ +RRQ+H+ PE+  EE+ T   +   + +L     +   +T   GI+  + GS S+  +  R D+D LP++EL +  + SK +G+MHACGHD+H T+ LG  + + + + +    +  LFQPAEE  AG   M    A  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  I  +Q ++SR  DPL S V
Sbjct:    4 LIEIRRQLHQIPEIGLEEYETQKYLLAIIQELTQNKPFIQVRTWQTGILVYLAGSQSQKTIGWRTDIDGLPIEELTDLPYASK-NGRMHACGHDIHMTVALGLLEKMSESQPR--DNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKVGDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDPLASAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LISMH (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28
Identity = 75/220 (34.09%), Postives = 117/220 (53.18%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S V
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGNNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LISMF (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28
Identity = 75/220 (34.09%), Postives = 117/220 (53.18%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S V
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_LISMC (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28
Identity = 75/220 (34.09%), Postives = 117/220 (53.18%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S V
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAV 223          
BLAST of FC873511 vs. ExPASy Swiss-Prot
Match: DAPL_EXIS2 (Putative N-acetyldiaminopimelate deacetylase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28
Identity = 74/223 (33.18%), Postives = 120/223 (53.81%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLV 786
            ++ + +RR++H+ PE  F+E  T A I  ++        +Y   +TG+  ++ G      +  RAD+D LP++E       S+  G MHACGHDVH ++ LG  + + +    +   V  LFQPAEEG  GA  MIK           ++G+H+    P G+IAS  G   A+    ++ + G+ GHAA PH TID ++  +++I+ LQ ++SR  +P+   V
Sbjct:    2 EYAIEMRRELHKIPEPGFKEFKTQAFILDQIRSYPEDRVSYDTFETGVFVRVKGLTGNRTIGYRADIDGLPIEEATGLPFCSEHPGFMHACGHDVHASIALGLLRRIVELP--VMDDVVFLFQPAEEGPGGAEPMIKSPLFEKYRPSEMYGLHVAPEYPVGTIASRPGVLFASAREVHITIYGQSGHAAFPHLTIDTVVAQAALIMQLQTIVSRSINPMNCSV 222          
The following BLAST results are available for this feature:
BLAST of FC873511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_LISMO6.397e-2935.14Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_STRPI8.355e-2933.04Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACLM8.355e-2933.63Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRPN1.091e-2833.04Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACH41.861e-2832.00Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLA2.431e-2833.63Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LISMH3.175e-2834.09Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMF3.175e-2834.09Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMC3.175e-2834.09Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_EXIS23.175e-2833.18Putative N-acetyldiaminopimelate deacetylase OS=Ex... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873511 ID=FC873511; Name=FC873511; organism=Citrus clementina; type=EST; length=788bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATG
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