FC873519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP25_HUMAN (Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP25 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 52/120 (43.33%), Postives = 59/120 (49.17%), Query Frame = 3 Query: 9 DIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP----NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS---SGSRKVELANDDIQGIQALYGNNP 347 DI I F H D PFDG GTLAHAF P +G H D +E W DL +VAVHE GH LGLGHSS ++IM P K L+ DD G+Q LYG P Sbjct: 169 DILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHFDDEETWTFGSKDGEGT-----DLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQDDRDGLQQLYGKAP 283
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP15_MOUSE (Matrix metalloproteinase-15 OS=Mus musculus GN=Mmp15 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 54/127 (42.52%), Postives = 64/127 (50.39%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYGNNPNFNGSSAPT 374 ADI + F +G HGD PFDG G LAHA+ P G H D DE W L VAVHE+GH LGL HSS AIM P + +L DD++GIQ LYG+ +G PT Sbjct: 191 ADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWT-----FSSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDNFQLPEDDLRGIQQLYGSP---DGKPQPT 309
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP14_PIG (Matrix metalloproteinase-14 OS=Sus scrofa GN=MMP14 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 58/134 (43.28%), Postives = 66/134 (49.25%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSP-PN--GRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQRDTS 395 ADI I F G HGD PFDG G LAHA+ P PN G H D E W D+ VAVHE+GH LGL HS+ AIM P + L +DD +GIQ LYG+ F P Q R TS Sbjct: 173 ADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWT-----VRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQQLYGSESGFPTKMPP--QPRTTS 299
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP11_MOUSE (Stromelysin-3 OS=Mus musculus GN=Mmp11 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 55/136 (40.44%), Postives = 66/136 (48.53%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQRDTSDAH 404 ADI I F HGD PFDGP G LAHAF P G H D DE W DL VA HE GH+LGL H++ A+M P + + L+ DD +GIQ LYG S APT + +D + Sbjct: 157 ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWT-------IGDNQGTDLLQVAAHEFGHVLGLQHTTAAKALMSP-FYTFRYPLSLSPDDRRGIQHLYGRPQMAPTSPAPTLSSQAGTDTN 284
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP15_HUMAN (Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15 Identity = 54/127 (42.52%), Postives = 64/127 (50.39%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYGNNPNFNGSSAPT 374 ADI + F +G HGD PFDG G LAHA+ P G H D DE W +L VAVHE+GH LGL HSS +AIM P +L DD++GIQ LYG +G PT Sbjct: 195 ADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWT-----FSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLPEDDLRGIQQLYGTP---DGQPQPT 313
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP12_RAT (Macrophage metalloelastase OS=Rattus norvegicus GN=Mmp12 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 55/129 (42.64%), Postives = 64/129 (49.61%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYG---NNPNFNGSSAP 371 ADI I F GDHGD FDG GTLAHAF P G H D E W +L VAVHE+GH LGL HS+ +IMYP+ L+ DDI IQ+LYG NP+ +P Sbjct: 153 ADITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT--------KSFQGTNLFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNPSLTNPGSP 273
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP13_XENLA (Collagenase 3 (Fragment) OS=Xenopus laevis GN=mmp13 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15 Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 3 TADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYG 338 TADI + F +HGD PFDGP G LAHAF P G H D DE + +L VA HE GH LGL HS ++M+P + + + + L +DD+QGIQ LYG Sbjct: 158 TADIMVSFGKKEHGDYYPFDGPDGLLAHAFPPGEKLGGDTHFDDDEMF--------STDNKGYNLFVVAAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQVLYG 265
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP25_MOUSE (Matrix metalloproteinase-25 OS=Mus musculus GN=Mmp25 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 54/131 (41.22%), Postives = 61/131 (46.56%), Query Frame = 3 Query: 9 DIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP----NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS---SGSRKVELANDDIQGIQALYG---NNPNFNGSSAP 371 DI I F H D PFDG GTLAHAF P +G H D +E W DL +VAVHE GH LGLGHSS ++IM P L DD G+Q LYG NPN + P Sbjct: 223 DIIIHFARAYHQDSYPFDGSGGTLAHAFFPGEHPISGDTHFDDEETWTFGSTDDNGI-----DLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPATYRLPQDDRDGLQQLYGRVSQNPNARPTRKP 348
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP12_RABIT (Macrophage metalloelastase OS=Oryctolagus cuniculus GN=MMP12 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 56/141 (39.72%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQRDTSDAHGAYF 416 ADI I F +G HGD FDG G +AHAF P G H D DE W +L VAVHE+GH LGL HS+ AIM+P+ L+ DDI+GIQ+LYG P + D T+ H F Sbjct: 152 ADIMILFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIW--------SKSYKGTNLFLVAVHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLYG-GPEQHQPMPKPDNPEPTACDHNLKF 283
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP11_RAT (Stromelysin-3 OS=Rattus norvegicus GN=Mmp11 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 54/136 (39.71%), Postives = 65/136 (47.79%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQRDTSDAH 404 ADI I F HGD PFDGP G LAHAF P G H D DE W DL VA HE GH+LGL H++ A+M P + + L+ DD +GIQ LYG S PT + +D + Sbjct: 157 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWT--------IGDKGTDLLQVAAHEFGHVLGLQHTTAAKALMSP-FYTFRYPLSLSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDTN 283 The following BLAST results are available for this feature:
BLAST of FC873519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873519 ID=FC873519; Name=FC873519; organism=Citrus clementina; type=EST; length=614bpback to top |