FC873519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP23_HUMAN (Matrix metalloproteinase-23 OS=Homo sapiens GN=MMP23A PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.684e-14 Identity = 48/118 (40.68%), Postives = 61/118 (51.69%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGD------GEPFDGPMGTLAHAFSPPNGRFHLDGDENWV-XXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYG 338 +D+RIGF+ +H D FDGP G LAHAF PP+G H D E WV DL VA HEIGH LGL HS A+M+ + + K L+ D++ G+ LYG Sbjct: 138 SDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQDELWGLHRLYG 254
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP17_HUMAN (Matrix metalloproteinase-17 OS=Homo sapiens GN=MMP17 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.684e-14 Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 3 Query: 3 TADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPN----GRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS---SGSRKVELANDDIQGIQALYGNNPNFNGSSAPTD 377 TADI+I F DH DG PFDGP GT+AHAF P + G H D DE W DL +VAVHE GH +GL H + +IM P + L +D + LYG + + ++ P + Sbjct: 185 TADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHFDDDEAWT-----FRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPYEDKVRVWQLYGVRESVSPTAQPEE 311
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP12_MOUSE (Macrophage metalloelastase OS=Mus musculus GN=Mmp12 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 8.207e-14 Identity = 54/129 (41.86%), Postives = 64/129 (49.61%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYG---NNPNFNGSSAP 371 ADI I F G HGD FDG GTLAHAF P G H D E W +L VAVHE+GH LGL HS+ +IMYP+ L+ DDI+ IQ+LYG P+ S+P Sbjct: 161 ADIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT--------KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGAPVKPPSLTKPSSP 281
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP11_HUMAN (Stromelysin-3 OS=Homo sapiens GN=MMP11 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 8.207e-14 Identity = 48/114 (42.11%), Postives = 58/114 (50.88%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYG 338 ADI I F HGD PFDGP G LAHAF P G H D DE W DL VA HE GH+LGL H++ A+M + + + L+ DD +G+Q LYG Sbjct: 153 ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWT-------IGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALM-SAFYTFRYPLSLSPDDCRGVQHLYG 258
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP17_MOUSE (Matrix metalloproteinase-17 OS=Mus musculus GN=Mmp17 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13 Identity = 42/91 (46.15%), Postives = 49/91 (53.85%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPN----GRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYP 266 ADI+I F DH DG PFDGP GT+AHAF P + G H D DE W DL +VAVHE GH +GL H + +IM P Sbjct: 182 ADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEPWT-----FRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQP 267
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP19_MOUSE (Matrix metalloproteinase-19 OS=Mus musculus GN=Mmp19 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13 Identity = 50/134 (37.31%), Postives = 61/134 (45.52%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGD-----GEPFDGPMGTLAHAFSPPNGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQRDT 392 ADIR+ F HG FDGP LAHA P G H D DE W +L +A HE+GH LGLGHS A+M P + +L DD+ GIQALYG S D++ +T Sbjct: 153 ADIRLSF----HGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGV-------NLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQPFFKLHPDDVAGIQALYGKR-----SPETRDEEEET 270
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP19_HUMAN (Matrix metalloproteinase-19 OS=Homo sapiens GN=MMP19 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13 Identity = 47/116 (40.52%), Postives = 54/116 (46.55%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGD-----GEPFDGPMGTLAHAFSPPNGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYG 338 ADIR+ F HG FDGP LAHA P G H D DE W +L +A HE+GH LGLGHS A+M P +L DD+ GIQALYG Sbjct: 152 ADIRLSF----HGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGV-------NLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYG 256
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: 095L_IIV3 (Probable matrix metalloproteinase 095L OS=Invertebrate iridescent virus 3 GN=IIV3-095L PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12 Identity = 45/117 (38.46%), Postives = 54/117 (46.15%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNP 347 A I + F G HGDG FDGP LAHAF P G HLD E W + V +HEIGH LGL HS +IMY + K +L +D+ + LYG P Sbjct: 210 AQIVVRFENGSHGDGWDFDGPGNVLAHAFQPGQSLGGDIHLDAAEPWT----IYDIDGHDGNSILHVVLHEIGHALGLEHSRDPTSIMYAWYT--PFKYDLGPEDVSAVAGLYGAKP 320
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP_TNAVC (Putative matrix metalloproteinase OS=Trichoplusia ni ascovirus 2c GN=ORF158 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.812e-11 Identity = 42/122 (34.43%), Postives = 57/122 (46.72%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPN--------GRFHLDGDEN-WVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNN 344 A +RI F+ DH D PFDG L HAF P G H+D DE + +L ++ +HE+GH +GL HS+ + +IMYP +L DD GIQ +Y N Sbjct: 104 AMVRIYFYRQDHNDSFPFDGKGKILGHAFYPNRHRINRGLAGEVHIDADEQFYFNDKLENMSEYDDSINLHAILLHEVGHAIGLLHSANKSSIMYPYYGGS----KLGVDDFNGIQQIYFAN 221
BLAST of FC873519 vs. ExPASy Swiss-Prot
Match: MMP_SFAVA (Putative matrix metalloproteinase OS=Spodoptera frugiperda ascovirus 1a GN=ORF14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11 Identity = 50/123 (40.65%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 6 ADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPNGRF----HLDGDENWVXXXXXXXXXXXXXXDLESVAV-HEIGHLLGLGHSSVEDAIMY-----PSISSGSRKVELANDDIQGIQALYGNN 344 A IRI F HGD + FDG G LAHAF P G H+D DE + V HEIGH LGL HSS + AIMY S ++G+ V L+ DD+ GI LY +N Sbjct: 116 AHIRISFKRRYHGDSD-FDGEGGLLAHAFLPNQGALSGDIHMDNDETFAFSFNDADYEGDNAPTSYFWTVLHEIGHTLGLQHSSSKQAIMYGFYVKRSFNNGA--VTLSTDDMNGINELYHSN 235 The following BLAST results are available for this feature:
BLAST of FC873519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873519 ID=FC873519; Name=FC873519; organism=Citrus clementina; type=EST; length=614bpback to top |