FC873558

Overview
NameFC873558
Unique NameFC873558
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP27A_HUMAN (Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 52/164 (31.71%), Postives = 79/164 (48.17%), Query Frame = 3
Query:  222 SSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARF---SEGVARAAKHPVGFIPFGLGVRTCVG 704
            +S  ++  + +        AG  TTSN LTW    L+  P  Q    EEV+ V  +  +P   D A +  L  +L E+LRLYP +    R  + ++E+ G+  P+ T+ +     V  D   + SE   F P R+   S+      +HP G +PFG GVR C+G
Sbjct:  316 ASGQLSPREAMGSLPELLMAGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGVVPAGQVPQHKDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLFPKNTQFVFCHYVVSRDPTAF-SEPESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLG 478          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP17A_HORSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus caballus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 66/245 (26.94%), Postives = 111/245 (45.31%), Query Frame = 3
Query:    6 LHPWLQIFADKKEHKLMET*QADQEITNEVDRERKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSN----------ITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATI-RRAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHP-VGFIPFGLGVRTCVG 704
            + P L+IF +K   K+        E+ +++  + K N NS + T M                L L+IQA  NS +N          ++D  I+      F AG +TT++++ W    L   P  +   +EE+ +  G    PT  D  +L  L   + E LR+ P     I  +A  D  +G + +  GT ++I + A+HH++  W  + + F P RF +        P + ++PFG G R+C+G
Sbjct:  217 IFPALKIFPNKSLEKMRHCVNIRNELLSKIFEKHKENFNSDSITSM----------------LDLLIQAKKNSDNNNTGPDQDSKLLSDKHILATIGDIFGAGVETTTSVVKWIVAFLLHDPQLKKKIQEEIDQNVGFSRTPTLSDRNRLLLLEATIREVLRIRPVAPMLIPHKALVDSSIGEFAVDDGTNVIINLWALHHNEKEW-HQPDRFMPERFLDPTGSQLISPSLSYLPFGAGPRSCIG 444          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: C4D20_DROME (Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 69/236 (29.24%), Postives = 112/236 (47.46%), Query Frame = 3
Query:   15 WLQIFADKKEHK-LMET*QADQEITNEVDRERKANGNSKNKTMMATAMPQEEQEKGPKD---LLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCG-SRDLP-TRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVG 704
            WL   A    H+ L+   +   + T++V  ER+              +   + E G K    LL +++Q+S N+   ++D DI EE  +F F G  TTS+ ++     +A HP  Q    EE+ RV G     P T+  +  LK L  ++ E++RLYPP+ A  R A+ ++E+G   IP  T + + +   H D A +  +   F P RF E       +   ++PF  G + C+G
Sbjct:  225 WLFPLAAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQP-LSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRD-ANYFPDPLSFRPERFLED-QEQGHNTFAYVPFSAGPKNCIG 457          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP6J1_BLAGE (Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6J1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 60/184 (32.61%), Postives = 94/184 (51.09%), Query Frame = 3
Query:  159 QEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGS-RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVEL-GGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVG 704
            +E+  +   DLL  +++  ++ +S +   D + +   F  AG  T+S  LT+    L++H   Q  AR E+  V    +   T   +  +K L M++NE+LR YP I    RR + D  L     +P GT + IP+ A+HHD   + S A  F+P RFSE   +   H   ++PFG G R C+G
Sbjct:  265 REKTGEKRNDLLDYLMELRTSETSKLDGDDFVAQAFGFLVAGFHTSSMTLTFALYELSVHQDIQTTARTEIKDVLEHHKKKVTYYSIKDMKYLDMVVNETLRKYPAIPFLDRRCQEDYPLTQDLMLPAGTGVYIPVYALHHDSKYFPSPAK-FDPERFSEKNKQNIPH-FAYMPFGEGPRNCIG 446          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 65/245 (26.53%), Postives = 114/245 (46.53%), Query Frame = 3
Query:    6 LHPWLQIFADKKEHKLMET*QADQEITNEVDRERKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNIT----------DYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATI-RRAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHP-VGFIPFGLGVRTCVG 704
            + PWL IF +K    + +  +   E+ + +  + K   NS + +                 L+ L+IQA +N+ +N T          D  I+      F AG +TT+++L+W    L  +P  +   ++E+ +  G    PT +D   L  L   + E LR+ P     I  RA +D+ +G + IP+ T ++I + A+HH +  W  + + F P RF +        P + ++PFG G R+C+G
Sbjct:  217 IFPWLTIFPNKTVDMIKKNVKIRDEVLSGILEKCKEKFNSDSIS----------------SLMDLLIQAKTNADNNNTSEGQGSNAFSDMHILATIADIFGAGIETTASVLSWIIAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHRANSDMSIGEFSIPKFTPVIINLWALHHSEKEW-DQPDRFMPERFLDPTGSHLITPSLSYLPFGAGARSCIG 444          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 63/235 (26.81%), Postives = 107/235 (45.53%), Query Frame = 3
Query:    6 LHPWLQIFADKKEHKLMET*QADQEITNEVDRERKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATI-RRAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHP-VGFIPFGLGVRTCVG 704
            + P L+IF +K   K+    +   E+  E+  + K N ++ + T M   + Q                AS   S  ++D  I+      F AG +TT++++ WT   L  HP      +EE+ +  G    PT  D  +L  L   + E LR+ P     I  +A  D  +G + + +GT ++I + A+HH++  W    + F P RF +        P + ++PFG G R+C+G
Sbjct:  217 IFPVLKIFPNKTLEKMKNYVKNRDELLREILEKHKENFSNDSITNMLDVLIQARMNSDNNGA------ASDQDSKLLSDKHILTTIGDIFGAGVETTTSVVRWTVAFLLHHPQLYKKLQEEIDQNIGFSRTPTMSDRNQLILLEATIREVLRIRPVAPTLIPHKAIMDSSIGEFAVDKGTNVIINLWALHHNEKEW-YRPDQFMPERFLDPTRSQLISPSLSYLPFGAGPRSCLG 444          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP6L1_BLAGE (Cytochrome P450 6l1 OS=Blattella germanica GN=CYP6L1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 56/176 (31.82%), Postives = 94/176 (53.41%), Query Frame = 3
Query:  186 DLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSR-DLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGG--YKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVG 704
            DL+  +IQ       ++++++++ +   FF AG +TTS+ + +    LA+HP  Q   R E+  V        T + V K+  L M+++E LR YPP+    R    D  + G    I +GT + + +L +H D +I+  +  DFNP RF++   ++  HP  +IPFG G R C+G
Sbjct:  268 DLVDSLIQLKKQLI-DVSEHEVLGQAMLFFAAGFETTSSAMAFAMYELALHPEIQDRLRTEIQEVTACHGGQVTYEGVKKMSYLDMVVSEVLRKYPPMSFIDRVCLHDYHIPGTDVVIEKGTPIFVSLLGLHRD-SIFYPDPEDFNPERFNK-EKKSGVHPFSYIPFGDGPRNCIG 440          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 3
Query:  222 SSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIR-RAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARF-SEGVARAAK--HPVGFIPFGLGVRTCVG 704
            +S  ++  + +        AG  TTSN LTW    L+ +P  Q   R+EV+ V  +  +P   D A +  L  +L E+LRLYP I A  R     ++E+GG+  P+ T+ +        D + + SE + F P R+  +G    +K  HP G +PFG GVR C+G
Sbjct:  319 TSGQLSPREALGSLPELLLAGVDTTSNTLTWALYHLSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTF-SEPDTFWPYRWLRKGQPETSKTQHPFGSVPFGYGVRACLG 482          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP135_DROME (Probable cytochrome P450 313a5 OS=Drosophila melanogaster GN=Cyp313a5 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 58/191 (30.37%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  183 KDLLGLMIQASSNSSS--------------NITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRV--CGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELG-GYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVG 704
            KD++   + ++ NSS                ++  D++ E  +  FA   T S  +    +L+AM P +Q    EE+  V   G     +  D+ KL  L  +L+E++RL P +   IR+    ++L  G+ IP G  L+I I   H ++ IWG +AN FNP  F     R A+ P  ++PF  G +TC+G
Sbjct:  246 KDIIDKKLSSTDNSSEPALIDRILNLVRIGELSYDDVMGEFSNIIFAASDTLSITVNNVLILMAMFPKYQDNVFEELAEVFPSGGEFEASHADLEKLVKLDRVLHETMRLIPAVPLLIRQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPENKR-ARPPYSYLPFSKGKKTCLG 435          
BLAST of FC873558 vs. ExPASy Swiss-Prot
Match: CP9H1_DROME (Probable cytochrome P450 9h1 OS=Drosophila melanogaster GN=Cyp9h1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 64/212 (30.19%), Postives = 114/212 (53.77%), Query Frame = 3
Query:  135 TMMATAMPQEEQEKGPK-DLLGLMIQASSNSSSNITDY-------------DIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGS-RDLP-TRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVEL---GGYKI---PRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVG 704
            +++  AM   ++ K  + D++ L+++A     ++++D              D++ +C  FFFAG +  S+ L + T  L ++P  Q    EE++ V    +  P T D + K+K L M++ E+LR +PP I+T R  + D++L    G K+    +G  L IPI ++HHD   +  +   FNP RF++G A  ++    ++PFG+G R C+G
Sbjct:  257 SLVTAAMRYRQEHKVVRPDMIHLLMEAKQQRLADLSDKSKDELYYSEFTADDLLAQCLLFFFAGFEIISSSLCFLTHELCLNPTVQDRLYEEIISVHEELKGQPLTYDKLTKMKYLDMVVLEALRKWPPSISTDRECRQDIDLFDENGQKLFSARKGDVLQIPIFSLHHDPENF-EDPEFFNPERFADGHALESR---VYMPFGVGPRNCIG 464          
The following BLAST results are available for this feature:
BLAST of FC873558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
CP27A_HUMAN5.508e-1831.71Sterol 26-hydroxylase, mitochondrial OS=Homo sapie... [more]
CP17A_HORSE7.193e-1826.94Steroid 17-alpha-hydroxylase/17,20 lyase OS=Equus ... [more]
C4D20_DROME7.193e-1829.24Probable cytochrome P450 4d20 OS=Drosophila melano... [more]
CP6J1_BLAGE9.395e-1832.61Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6... [more]
CP17A_MESAU9.395e-1826.53Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
CP17A_FELCA9.395e-1826.81Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis ... [more]
CP6L1_BLAGE1.227e-1731.82Cytochrome P450 6l1 OS=Blattella germanica GN=CYP6... [more]
CP27A_RABIT1.227e-1733.33Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
CP135_DROME1.227e-1730.37Probable cytochrome P450 313a5 OS=Drosophila melan... [more]
CP9H1_DROME1.602e-1730.19Probable cytochrome P450 9h1 OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG01FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873558 ID=FC873558; Name=FC873558; organism=Citrus clementina; type=EST; length=704bp
AAAGTCTTCATCCCTGGCTACAGATTTTTGCCGACAAAAAGGAACATAAG
CTCATGGAAACTTGACAAGCAGATCAAGAGATCACTAACGAAGTTGATCG
AGAGAGAAAAGCGAATGGGAATAGCAAGAATAAGACGATGATGGCGACGG
CGATGCCGCAGGAGGAACAAGAAAAGGGACCAAAAGATTTGTTAGGGCTA
ATGATTCAAGCATCATCGAATTCCTCCTCCAACATAACAGATTATGACAT
AATTGAAGAGTGCAAGAGCTTCTTCTTTGCTGGCAAACAGACCACATCCA
ATCTGCTGACGTGGACAACCGTCCTTCTAGCTATGCACCCACACTGGCAG
GTGCTAGCACGTGAGGAGGTTCTAAGGGTGTGTGGATCACGTGACTTACC
CACCAGAGATGATGTTGCAAAGCTTAAGACCCTAAGCATGATACTAAATG
AATCCCTTCGATTGTATCCGCCAATAATCGCGACAATCAGACGGGCCAAG
GCCGACGTGGAGTTGGGTGGATACAAGATACCGCGTGGGACCGAGTTGCT
GATACCAATCCTGGCCGTTCATCACGACCAAGCAATTTGGGGGAGTGAGG
CAAACGATTTCAATCCAGCTAGATTCTCAGAGGGAGTGGCCCGGGCAGCG
AAGCATCCCGTGGGGTTCATACCATTCGGCCTTGGGGTCCGCACCTGCGT
TGGG
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