FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.457e-44
Identity = 98/269 (36.43%), Postives = 153/269 (56.88%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS-----RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D G+P+D+RHM GFG  T+++ N  G+  +VK+H++   G++   DDE A ++ G +   + +DLYD+I  G+YP+WK+YIQ +  +       +P D+TK W +   PL  VG   LN+N +N+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+     +  P      +P+  D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGMPKDFRHMHGFGSHTYSMYNDEGERVWVKYHFRTQQGIENYTDDE-AAEIVGQDRESSQRDLYDAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKGDYPLIEVGEFELNRNPENYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENMCPFSR---DGQMRFLDGNQGGGPHYYPNNKGVYQSQPEYKKPAFPVDGD---GYEYNQRQDDDNYFEQPGKLFRLQSDDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAU (Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.903e-44
Identity = 98/267 (36.70%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     ++P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFTDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHHYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.485e-44
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 587
            W     GIP+  RH++G+GV TF LV   G    VKF WK   G   L+  EEA  +GG N     QDL+D+I +G YPEW+L  Q ++   + +FDFD LD TK  PE+++P  P+G++VLN+N  N+FAE E + F PG VV GI +++D +LQ R+++Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  234 WAMSGHGIPRSMRHVDGWGVHTFRLVTDEGNSTLVKFRWKTLQGRAGLVW-EEAQALGGKNPDFHRQDLWDAIESGRYPEWELGFQLVNEADQSKFDFDLLDPTKIIPEELVPFTPIGKMVLNRNPKNYFAETEQIMFQPGHVVRGIDFTDDPLLQGRLYSYLDTQLNRHGGPNFEQLPINRPRIPFHNNNRDG 426          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.485e-44
Identity = 99/267 (37.08%), Postives = 154/267 (57.68%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D G+P+ +R+M GFG  T+++ N  G+  +VK+H++   G++   D EEA K+ G +   + +DLY++I  G+YP+WK+YIQ +  +       +P D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTD-EEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.485e-44
Identity = 99/267 (37.08%), Postives = 154/267 (57.68%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D G+P+ +R+M GFG  T+++ N  G+  +VK+H++   G++   D EEA K+ G +   + +DLY++I  G+YP+WK+YIQ +  +       +P D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTD-EEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.239e-44
Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKML-QCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 587
            W     GIP+ +RH++GFGV TF LV ++G    VKFHWK   G+  ++  EEA ++ G N  +  QDL++SI AG YPEW+L +Q +D + + +F FD  D TK  PE+ +PL P+G++ LN+N  N+FAE E + F PG VV G+ ++ D +L Q R+F+Y DTQ +R  GPN+  LP+N P+    NN+ DG
Sbjct:  227 WAMAGHGIPRSFRHVDGFGVHTFRLVTEDGSTKLVKFHWKTLQGLASMVW-EEAQQISGKNPDYMRQDLFESIEAGRYPEWELNVQIMDEEDQLRFGFDLFDPTKIVPEEYVPLTPLGKMTLNRNPRNYFAETEQVMFQPGHVVRGVDFTEDPLLQQGRLFSYLDTQLNRNGGPNFEQLPINQPRVAIHNNNRDG 420          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.239e-44
Identity = 99/267 (37.08%), Postives = 154/267 (57.68%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D G+P+ +R+M GFG  T+++ N  G+  +VK+H++   G++   D EEA K+ G +   + +DLY++I  G+YP+WK+YIQ +  +       +P D+TK W +   PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTD-EEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFAPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKER 444          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STAAB6.541e-4537.08Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA86.541e-4537.08Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA36.541e-4537.08Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATA_STAHJ1.457e-4436.43Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_STAAU1.903e-4436.70Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=... [more]
CATB_AJECA2.485e-4445.88Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATA_STAES2.485e-4437.08Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ2.485e-4437.08Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATB_EMENI4.239e-4445.13Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_STAEP4.239e-4437.08Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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