FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.239e-44
Identity = 98/267 (36.70%), Postives = 154/267 (57.68%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D E A ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EVAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.231e-44
Identity = 93/233 (39.91%), Postives = 140/233 (60.09%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-DPTRHAERYPIPSDVITGRREK 707
            F D GIP  YRHM GFG  T++L+N  G+ H+VK+H+K   G+K L    +A ++ G++  +A +DL+ +I  G++P+W++ IQ +     +    +P DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D  R+R+G N+  LPVNAP+ P  +   DG M F  +     +Y P+ Y D  + A +Y  P+  ++G  ++
Sbjct:  180 FSDRGIPDGYRHMHGFGSHTYSLINAKGERHWVKWHYKTKQGIKNLAP-ADAARLAGTDPDYAQRDLFGAIERGDFPKWRVCIQIMTEAQANAHYENPFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNSYQRDGSMAFGSNGGAAPNYEPNSYADAPKQAPQYAEPALALSGAADR 411          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 101/273 (37.00%), Postives = 147/273 (53.85%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPT-------RHAER------YPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQE 782
            W     GIP+  RH++GFG+ TF  V  NG    VKFHWK   G   ++  EEA +V G N     QDL+++I AG YPEW+L +Q +D + + +F FD  D TK  PE+ +P+  +G++ LN+N  N+FAE E + F PG +V G+ ++ D +LQ R+F+Y DTQ +R  GPN+  LP+N P+ P  NN+ DG          +   P+ Y P        + A +      +  P    TGR  +A     E+ + QP   Y S  P  Q+
Sbjct:  228 WAMSGHGIPRSLRHVDGFGIHTFRFVTDNGDSKLVKFHWKSLQGKASMVW-EEAQQVSGKNPDFMRQDLFEAIEAGRYPEWELGVQIMDEEDQLKFGFDLFDPTKIVPEEYVPITKLGKMTLNRNPRNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINQPRVPVHNNNRDGAGQMF-----IPLNPNAYSPNTLNKGSPKQANQTVGKGFFTAPGRESTGRFTRAVSPSFEDVWSQPRLFYNSLTPAEQQ 494          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_ERYGR (Catalase OS=Erysiphe graminis subsp. hordei GN=CAT1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.233e-43
Identity = 101/268 (37.69%), Postives = 144/268 (53.73%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPS--------RYDPTRHAERYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQE 782
            W     GIP+ YRHM+GFGV T  LV  +GK   VK+HWK   G   L+  EEA  + G N     QDL+D I AGN PEW+L +Q +D +    F FD LD TK+ PE+++P+  +G++ L  N  N+FAE E + F PG +V G+ +S+D +LQ RI++Y DTQ +R  GPN+  LPVN P+    NN+ DG         +  Y P+        + + T+    +  PS  + G   +       + + QP   Y S  P  Q+
Sbjct:  230 WAMSGHGIPRSYRHMDGFGVHTMRLVTDDGKSKLVKWHWKTKQGKASLVW-EEAQILAGKNPDFHRQDLWDDINAGNGPEWELGVQIVDEEDVQAFGFDLLDPTKFLPEELVPVTILGKMKLTDNPTNYFAETEQVMFQPGHIVRGVDFSDDPLLQGRIYSYLDTQLNRNGGPNFEQLPVNRPRTKVHNNNRDGAGQMFIHTNKAPYSPNSLSGGNPKQANQTKGRGFFTAPSRKVVGSLHRGTASSFADVWSQPRMFYNSLIPSEQQ 496          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.611e-43
Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 587
            W     GIP+ +RH++GFGV TF  V  +G    VKFHWK   G   ++  EEA +  G N     QDL+D+I AG YPEW+L +Q +D + + +F FD LD TK  PE+ +P+  +G++ LN+N  N+FAE E + F PG +V G+ ++ D +LQ R+F+Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  229 WAMSGHGIPRSFRHVDGFGVHTFRFVTDDGASKLVKFHWKSLQGKASMVW-EEAQQTSGKNPDFMRQDLHDAIEAGRYPEWELGVQIMDEEDQLRFGFDLLDPTKIVPEEFVPITKLGKMQLNRNPRNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINQPRVPVHNNNRDG 421          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.748e-43
Identity = 100/267 (37.45%), Postives = 151/267 (56.55%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N  G+  +VK+H++   G++ L D EEA  V  ++   + +DL+++I  G+YP+WK+YIQ +  +       +P D+TK W     PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+    YD     ++ P P+D   G       + +N F+QPG+ +R  + + +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENLTD-EEAANVIATDRDSSQRDLFNAIENGDYPKWKMYIQVMTEEQARNHKDNPFDLTKVWYHGDYPLIEVGEFELNRNPNNYFQDVEQAAFAPTNIVPGLDYSPDKMLQGRLFPYGDAQRYRLGVNHWQIPVNQPKGVGIENLCPFSR---DGQMRILDDNQGGGPHYYPNNQGVYDSQPEFKKPPFPADG-DGYEYNQRQDDDNYFEQPGKLFRLQSDEAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.589e-43
Identity = 93/221 (42.08%), Postives = 129/221 (58.37%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRY-----DPTRHAE 662
            F D GIP  YRHM GFG  T++L+N  G+  +VK+H+K   G+K L    +A ++ G++  +A +DL+++I  G+YP W + IQ +        D +P DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D  R+R+G N+  LPVNAP+CP  +   DG M         +Y P+ Y        RHAE
Sbjct:  178 FSDRGIPDGYRHMHGFGSHTYSLINAQGERTWVKWHFKTQQGIKNLAP-ADAARLAGTDPDYAQRDLFEAIERGDYPRWTVCIQVMSEAEAASRDENPFDVTKTWSQKDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRCPVNSYQRDGSMATGSYGSAPNYEPNSYAAAPKQSPRHAE 397          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.687e-43
Identity = 97/269 (36.06%), Postives = 153/269 (56.88%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFL 791
            D GIP+D RHM GFG  T+++ N +G+  +VK H++   G++ L D EEA ++  +    + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E +AF    ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  +   +ER L
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKLHFRTQQGIENLTD-EEAAEIIATGRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQVAFASTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEGAKERIL 446          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_NEIGO (Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.044e-42
Identity = 87/207 (42.03%), Postives = 122/207 (58.94%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRY 641
            D GIP  YRHM GFG  T++L N+ G+  +VKFH++   G+K L ++E A  +     SH  +DLY++I  G +P+W +YIQ +      +  + P D+TK WP+   PL  V    LN+N +NFFA+ E  AF P  +VPGI  S DKMLQ R+F Y D QR+RLG N+  +PVN P+CP  +N  DG        +   Y P+ +
Sbjct:  183 DRGIPASYRHMHGFGSHTYSLWNEAGERFWVKFHFRSQQGIKNLTNEEAAKIIADDRESHQ-RDLYEAIERGEFPKWTMYIQVMPEADAAKVPYHPFDLTKVWPKKDYPLIEVAEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRATELRQPAHYEPNSF 388          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.364e-42
Identity = 97/266 (36.47%), Postives = 142/266 (53.38%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH-YDGFMNFMHRDEEVDYFPSRYDPTRHAER---YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFL 791
            +W F D GIP  YRHM G+G  T+   N+ G+V +VK+H+K   G+K L  DE A ++ G +     +DL ++I  G++P W + +Q +       + F+P D+TK WP +  P   +G L LN+N +N FAE E   F+P   VPGI  S DKMLQ R+FAYGD  R+R+G N   LPVN P       H  DGF+         +Y P+ +      +R    P P   +TG        ++++F Q G+ YR  + D + R +
Sbjct:  176 TWLFGDRGIPASYRHMNGYGSHTYQWNNEAGEVFWVKYHFKTDQGIKNLTQDE-ANRLAGEDPDSHQRDLREAIERGDFPTWTVQVQIMPAADAAGYRFNPFDLTKVWPHEDYPPVEIGTLELNRNPENIFAEVEQSIFSPAHFVPGIGPSPDKMLQGRLFAYGDAHRYRVGINADHLPVNRPHATEARTHSRDGFLYDGRHKGAKNYEPNSFGGPVQTDRPLWQPTPVTGVTGDHAAPSHAEDDDFTQAGDLYRLMSEDEKGRLI 440          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STAAR4.239e-4436.70Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_ONCVE7.231e-4439.91Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATB_ASPOR1.233e-4337.00Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATA_ERYGR1.233e-4337.69Catalase OS=Erysiphe graminis subsp. hordei GN=CAT... [more]
CATB_ASPFU1.611e-4344.33Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CATA_STAWA2.748e-4337.45Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]
CATA_PSEPU3.589e-4342.08Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATB_STAAA4.687e-4336.06Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_NEIGO1.044e-4242.03Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=... [more]
BCA_STRVL1.364e-4236.47Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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