FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.326e-42
Identity = 84/189 (44.44%), Postives = 117/189 (61.90%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 587
            D GIP  YRHM GFG  T++  N+ G+  +VKFH++   G+K L D E A  +     SH  +DLY++I  G++P+W L++Q +     ++  + P D+TK W +   PL  VG   LN+N +NFFA+ E  AF P  +VPGI  S D+MLQ R+F Y D QR+RLG NY  +PVN P+CP  +N  DG
Sbjct:  190 DRGIPASYRHMHGFGSHTYSFWNEAGERFWVKFHFRTQQGIKNLTDAEAAEIIANDRESHQ-RDLYEAIERGDFPKWTLFVQIMPEADAEKVPYHPFDLTKVWSKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDG 377          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.968e-42
Identity = 95/265 (35.85%), Postives = 150/265 (56.60%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQE 782
            D GIP+ +R+M GFG  T+++ N  G+  +VKFH +   G++     EEA +V   +   + +DL+++I  GN+P+WK+YIQ +  +       +P D+TK W +D  PL  VG   LN+N +N+F + E  AF P  +VPG+ +S DKMLQ R+F+YGDTQR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+         +Y  P+  I G+  +     + +N F+QPG+ +R  + + Q+
Sbjct:  180 DRGIPKGFRNMHGFGSHTYSMYNDKGERFWVKFHHRTQQGIENY-SAEEAEQVMAKDRDSSQRDLFNNIEQGNFPKWKMYIQVMTEEQARNHKDNPFDLTKVWYKDEYPLIEVGEFELNRNPENYFQDVEQAAFAPTNIVPGLDFSPDKMLQGRLFSYGDTQRYRLGVNHWQIPVNQPKGVGMENICPFSR---DGHMRILDNNQGASTHYYPNSNGAFEDQPQYKKPALDIQGQAYEYDFREDDDNYFEQPGKLFRLLSSEEQQ 440          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_YEAST (Peroxisomal catalase A OS=Saccharomyces cerevisiae GN=CTA1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.276e-40
Identity = 100/268 (37.31%), Postives = 140/268 (52.24%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHY-----DGFMN----------FMHRDEEVDYFPSRYDPTRHAERY---PIPSDVITGRREKACIEKENNF----KQPGER 752
            F D G P +YR M G+   T+   NKNG  HYV+ H K   G+K L   EEA K+ GSN  +  QDL+++I  GNYP W +YIQT+      +  F   D+TK WP+   PL+ VG++VLN+N  NFFA+ E  AF P   VP    S D +LQ R+F+Y D  R+RLGPN+  +PVN   CP+ +  +     DG MN          ++  D+   Y        +H E +    IP    T   +   ++  N +    KQPG++
Sbjct:  197 FSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKTDQGIKNLTI-EEATKIAGSNPDYCQQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYADAHRYRLGPNFHQIPVN---CPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRPIQQHQEVWNGPAIPYHWATSPGDVDFVQARNLYRVLGKQPGQQ 460          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATR_ASPNG (Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.667e-40
Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 695
            W     GIP+ +RHM G+GV +F  V  NG    V+  WK   GV  L+ DE A    G N  +  QDLY+++  G+YP+++L  Q +D     +F FD LD TK  PE+++P  P+G + LN N  N+FAE E   F PG VVPGI +++D +LQ R+F+Y DTQ  RH  GPN+  +PVN P+ P  NN+ DGF       +++      Y P   +  YP+ ++   G
Sbjct:  232 WLMSGNGIPRSFRHMNGYGVHSFRFVAANGTSKVVRTPWKSQQGVASLVWDE-AQAAAGKNSDYHRQDLYNAMPNGHYPKYELQAQIMDEADMLRFGFDLLDPTKLVPEEVVPYTPLGMMELNANPTNYFAEVEQAGFQPGHVVPGIDFTDDPLLQGRLFSYLDTQLTRHG-GPNFEQIPVNRPRKPVHNNNRDGF-----GQQQIPTNNWAYTPNSMSNGYPMQANQTQG 455          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.667e-40
Identity = 96/266 (36.09%), Postives = 145/266 (54.51%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQER 785
            D GIP+ YR+M GFG  T+++ N  G+  +VKFH +   G++ L  DE A K+   +   + +DL+++I   +YP+WK YIQ +  +       +P D+TK W +   PL  VG   LN+N DN+F + E  AF P  +VPGI +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+          +  P   + G   +     + +N F+QPG  +R  + ++QER
Sbjct:  182 DRGIPKGYRNMHGFGSHTYSMYNDKGERVWVKFHHRTQQGIENLQPDE-AAKIIADDRESSQRDLFEAIENKDYPKWKTYIQVMTEEQARNHKDNPFDLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENICPFSR---DGQMRILDNNQGGGTHYYPNSDGSFEDQPEFKKPGLKVEGEAYEYDFRQDDDNYFEQPGRLFRLQSKEQQER 443          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.177e-40
Identity = 94/258 (36.43%), Postives = 146/258 (56.59%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH--YDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE---NNFKQPGERYRS 761
            ++ + D G P  +RHM G+G  TF  +NK+ +  YVK+H+K   G+K L + + A ++   +  +A +DL+++IA   +P W   IQ +     + + ++  DVTK WP    PL PVG+LVL++N +N+F + E  AF P  +VPGI  S D+MLQ R+F+Y DT RHRLG NY  +PVN P      ++   DG M    ++  +++Y P+  D     +R    S   T     AC  +E   ++F+QPG  YR+
Sbjct:  186 TFLYTDRGTPDGFRHMNGYGSHTFKFINKDNEAFYVKWHFKTNQGIKNL-NRQRAKELESEDPDYAVRDLFNAIAKREFPSWTFCIQVMPLKDAETYKWNVFDVTKVWPHGDYPLIPVGKLVLDRNPENYFQDVEQAAFAPAHMVPGIEPSEDRMLQGRMFSYIDTHRHRLGANYHQIPVNRPWNARGGDYSVRDGPMCVDGNKGSQLNYEPNSVDGFPKEDRNAAVSGTTTVSGTVACHPQEHPNSDFEQPGNFYRT 442          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.844e-40
Identity = 82/192 (42.71%), Postives = 117/192 (60.94%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 596
            D G+P D RH+ G+G  T++  N  G+ ++VKFH+K   G K   +  EA +V G       +DL+ +I  G +P+WK+ +Q +     D+  ++P D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKCP  + H DG MN
Sbjct:  181 DRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHFKTMQGHKHWTN-AEAEQVIGRTRESTQEDLFSAIENGEFPKWKVQVQIMPELDADKTPYNPFDLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCPVHHYHRDGQMN 371          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.844e-40
Identity = 82/192 (42.71%), Postives = 117/192 (60.94%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 596
            D G+P D RH+ G+G  T++  N  G+ ++VKFH+K   G K   +  EA +V G       +DL+ +I  G +P+WK+ +Q +     D+  ++P D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKCP  + H DG MN
Sbjct:  181 DRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHFKTMQGHKHWTN-AEAEQVIGRTRESTQEDLFSAIENGEFPKWKVQVQIMPELDADKTPYNPFDLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCPVHHYHRDGQMN 371          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.851e-40
Identity = 79/182 (43.41%), Postives = 112/182 (61.54%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP 554
            + F + G P  YR M G+   T+   N  G+  YV+ H+    GV  L+D EEA ++ G +  H+T+DL+++I  G+YP W+ YIQT+  +   +  F   D+TK WP    PL+  GR  LN+N  N++AE E +AF+P   VPG+  SND +LQ R+F+Y DT RHRLGPNY  +PVN P
Sbjct:  188 YLFSNRGTPASYRTMNGYSGHTYKWYNSKGEWVYVQVHFIANQGVHNLLD-EEAGRLAGEDPDHSTRDLWEAIEKGDYPSWECYIQTMTLEQSKKLPFSVFDLTKVWPHKDFPLRHFGRFTLNENPKNYYAETEQIAFSPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGPNYHQIPVNCP 368          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAS1 (Catalase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=katA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.411e-39
Identity = 94/266 (35.34%), Postives = 144/266 (54.14%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQER 785
            D GIP+ +R+M GFG  T+++ N  G+  +VKFH +   G++ L  DE A  +     S + +DL+++I   +YP+WK YIQ +  +       +P D+TK W +   PL  VG   LN+N DN+F + E  AF P  +VPGI +S D+MLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+          +  P   + G   +     + +N F+QPG  +R  + ++QER
Sbjct:  182 DRGIPKGFRNMHGFGSHTYSMYNDKGERVWVKFHHRTQQGIENLQPDEAARTIAEDRES-SQRDLFEAIENKDYPKWKTYIQVMTEEQARNHKDNPFDLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDRMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRILDNNQGGSTHYYPNSEGAFEDQPEFKKPGLKVEGEAYEYDFREDDDNYFEQPGRLFRLQSKEQQER 443          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_HAEIN2.326e-4244.44Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_STAXY3.968e-4235.85Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_YEAST1.276e-4037.31Peroxisomal catalase A OS=Saccharomyces cerevisiae... [more]
CATR_ASPNG1.667e-4039.83Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1[more]
CATB_STAXY1.667e-4036.09Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CATA_TOXGO2.177e-4036.43Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]
CATA_BRUME2.844e-4042.71Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB2.844e-4042.71Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]
CATA_PICAN4.851e-4043.41Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATA_STAS11.411e-3935.34Catalase OS=Staphylococcus saprophyticus subsp. sa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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