FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 4.106e-39
Identity = 81/192 (42.19%), Postives = 116/192 (60.42%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 596
            D G+P D RH+ G+G  T++  N  G+ ++VKFH+K   G K   +  EA +V G       +DL+ +I  G +P+WK+ +Q +     D+  ++P D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKC   + H DG MN
Sbjct:  181 DRGLPTDVRHINGYGSHTYSFWNDAGERYWVKFHFKTMQGHKHWTN-AEAEQVIGRTRESTQEDLFSAIENGEFPKWKVQVQIMPELDADKTPYNPFDLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCLVHHYHRDGQMN 371          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.195e-38
Identity = 94/255 (36.86%), Postives = 137/255 (53.73%), Query Frame = 3
Query:   27 GIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPI----PSDVITGRREKACIEKENNFKQPGERYRSWAPDRQ 779
            G+P+ +R M G+G  T+  VN  G+ H+VK+H+    GV  L +DE A K+ G N     QDL++SIA G++P+W LYIQ I  +    + F+P D+TK   +   P   VG L LN+N +N FA+ E  AF+P   VPGI  S D+ML  R FAY D Q +R+G +   LPVN PK    N  ++G M + H  +   Y P+    +   E  P+     +D    R  +A    +++F Q G   R    D++
Sbjct:  189 GLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDE-ATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQE 442          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 2.038e-38
Identity = 85/199 (42.71%), Postives = 112/199 (56.28%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKC-----PHRNNHYDGFMN 596
            F D G P  YR M G+   T+   N  G+  YV+ H+    G+K L + EEA  + GSN  +A +DL+ +IAAGNYP W  YIQT+      + +F   D+TK WP    P++  G+  LN+N  N+FAE E  AF+P   VP +  S D +LQ R+F+Y DT RHRLG NY  +PVN P       PH     DG MN
Sbjct:  178 FSDRGTPASYREMNGYSGHTYKWSNNKGEWFYVQVHFISDQGIKTLTN-EEAGSLAGSNPDYAQEDLFKNIAAGNYPSWTCYIQTMTEAQAKEAEFSVFDLTKVWPHGKYPMRRFGKFTLNENPKNYFAEVEQAAFSPAHTVPHMEPSADPVLQSRLFSYADTHRHRLGTNYTQIPVNCPVTGAVFNPHMR---DGAMN 372          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_CANAL (Peroxisomal catalase OS=Candida albicans GN=CTA1 PE=2 SV=4)

HSP 1 Score: 157.532 bits (397), Expect = 7.744e-38
Identity = 86/217 (39.63%), Postives = 121/217 (55.76%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQR-HRLGPNYLMLPVNAPKC-----PHR-------NNHYDGFMNFMHRDEEVDY 626
            F D G P  YR M G+   T+   NK G+  YV+ H+    G+K L ++EEA  + GSN  +A +DL+ +IAAGNYP W  YIQT+      + +F   D+TK WP    P++  G+  LN+N +N+FAE E  AF+P   VP +  S D +LQ R+F+Y DT R HRLG NY  +PVN P       PH        N +     N++  D+ V++
Sbjct:  178 FSDRGTPASYREMNGYSGHTYKWSNKKGEWFYVQVHFISDQGIKTL-NNEEAGALAGSNPDYAQEDLFKNIAAGNYPSWTAYIQTMTEAEAKEAEFSVFDLTKVWPHRKYPMRRFGKFTLNENPENYFAEVEQAAFSPAHTVPYMEPSADPVLQSRLFSYADTHRPHRLGTNYTQIPVNCPVTGAVFNPHSRDGAMTVNGNLGSHPNYLASDKPVEF 393          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.011e-37
Identity = 93/257 (36.19%), Postives = 137/257 (53.31%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFL 791
            D GIP  YR M GFG  TF  VN  G+  +VK+H+K   G+  L  +E A ++ G +  +   DL+D+I  G+YP W + +Q +  +    +  D  DVTK   +   PL  +G++VL++N  N F + + LAF+P  +VPGI  S DK+LQ R+F Y D +R+RLG NY  LPVN PK P  N   DG M   ++   V+Y P+  D         I  D ++G       + +  +   G+ YR  + D Q R +
Sbjct:  180 DRGIPASYRMMHGFGSHTFKWVNAQGEQFWVKYHFKTNQGIHNL-SNELADELAGKDTDYLQNDLFDAIETGDYPSWTVAVQLVPYEDGLNYPQDIFDVTKVISQKDYPLIEIGQMVLDENPTNNFEDIQELAFSPANLVPGIEASPDKLLQGRLFGYKDAERYRLGANYEQLPVNRPKVPVHNYERDGAM-AQNQATGVNYEPNSQDGPTEVPAAKIHGDQLSGTTGNFSADPD-YYSAAGKLYRLLSADEQTRLI 433          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37
Identity = 76/192 (39.58%), Postives = 115/192 (59.90%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 596
            D G+PQ   HM G+G  T++  N  G+ ++VKFH+K   G K   ++E    +G +   +  + L+ +I  G +P W + +Q +     ++  ++P D+TK WP    P   +G L LN+N +N+FAE E  AF+P  +VPGI +S DK+LQ RIF+Y D  R+RLG +Y  +PVN P+CP  + H DG MN
Sbjct:  181 DRGLPQTPMHMNGYGSHTYSFWNDAGERYWVKFHFKTQQGHKFFTNEEGEAVIGKTREGYQ-ESLFYAIENGEFPRWTVQVQIMPELDVEKTPYNPFDLTKVWPHADYPPVEIGVLELNRNPENYFAEIENAAFSPSNIVPGIGFSPDKVLQARIFSYADAHRYRLGTHYEHIPVNQPRCPVHHYHRDGQMN 371          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_BOTFU (Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.597e-35
Identity = 84/227 (37.00%), Postives = 118/227 (51.98%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSD 683
            + F D   P D++H + F + T+     +G   YVK H K   GVK    DE   K G  +    T+ LY+ I    YP W ++ Q IDP   + +  +  D TK +P    PL+  G++ LN+N+DNFFAE E  AF+P  +VPG   + D ++Q R  AY DTQR+RLG N++ LPVNAP K P      DG      +     +YFPS +     A +Y  P +
Sbjct:  186 FLFSDRATPVDFQHADIFSINTYKFTKSDGSFTYVKIHLKTNQGVKNFTQDEANQKAG-VDPDFQTRSLYEDIENQKYPTWDVFAQIIDPVKAENYHINIFDATKTFPFSEFPLRKFGKITLNRNVDNFFAEQEQSAFSPTNLVPGWALTPDPIIQTRALAYADTQRYRLGANFVQLPVNAPYKKPFTPLIRDGAATVNGNLGGTPNYFPSSFYNVGAATQYAQPDE 411          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATT_YEAST (Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=1 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 4.698e-35
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNP-GIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK---CPH 566
            ++ F D G P  +  M  +   +F +VNK GK  YV+FH     G + L  D+ A ++ GS+  +    L+  +  G  P++  Y+QT+ P+   +F +   D+TK WP    PL+  G + L +N+DN+F E E +AF+P    +PGI  SND +LQ R+F+Y DTQRHRLG NY  LPVN P+   CP+
Sbjct:  189 TYMFGDRGTPASWASMNAYSGHSFIMVNKEGKDTYVQFHVLSDTGFETLTGDK-AAELSGSHPDYNQAKLFTQLQNGEKPKFNCYVQTMTPEQATKFRYSVNDLTKIWPHKEFPLRKFGTITLTENVDNYFQEIEQVAFSPTNTCIPGIKPSNDSVLQARLFSYPDTQRHRLGANYQQLPVNRPRNLGCPY 378          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATT_YEAS7 (Catalase T OS=Saccharomyces cerevisiae (strain YJM789) GN=CTT1 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.698e-35
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNP-GIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK---CPH 566
            ++ F D G P  +  M  +   +F +VNK GK  YV+FH     G + L  D+ A ++ GS+  +    L+  +  G  P++  Y+QT+ P+   +F +   D+TK WP    PL+  G + L +N+DN+F E E +AF+P    +PGI  SND +LQ R+F+Y DTQRHRLG NY  LPVN P+   CP+
Sbjct:  189 TYMFGDRGTPASWASMNAYSGHSFIMVNKEGKDTYVQFHVLSDTGFETLTGDK-AAELSGSHPDYNQTKLFTQLQNGEKPKFNCYVQTMTPEQATKFRYSVNDLTKIWPHKEFPLRKFGTITLTENVDNYFQEIEQVAFSPTNTCIPGIKPSNDSVLQARLFSYPDTQRHRLGANYQQLPVNRPRNLGCPY 378          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 73/182 (40.11%), Postives = 101/182 (55.49%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP 554
            + F + G P  YR M G+   ++   N  G+      H+    GV  + D EEA  + G +    T DLY +I  G+YP W+ Y+QT+  +   +  F   D+TK WP    PL+  G+  LN+N  N+FAE E  AF+P   VPG+  SND +LQ R+F+Y DT RHRLG NY  +PVN P
Sbjct:  186 YLFSNRGTPTSYRKMNGYSGHSYKWYNAKGE-WVSSVHFISNQGVHNMTD-EEAGDLSGKDPDFQTMDLYKAIEQGDYPSWECYVQTMTLEEAKKQPFSVYDLTKVWPHKDFPLRHFGKFTLNENAQNYFAEVEQAAFSPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGVNYSQIPVNCP 365          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_BRUSU4.106e-3942.19Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATA_MICLU1.195e-3836.86Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CATA_CANTR2.038e-3842.71Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_CANAL7.744e-3839.63Peroxisomal catalase OS=Candida albicans GN=CTA1 P... [more]
CATA_LACSK1.011e-3736.19Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATA_RHIME6.556e-3739.58Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_BOTFU3.597e-3537.00Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 ... [more]
CATT_YEAST4.698e-3539.27Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=... [more]
CATT_YEAS74.698e-3539.27Catalase T OS=Saccharomyces cerevisiae (strain YJM... [more]
CATA_CANBO7.501e-3340.11Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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