FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.269e-20
Identity = 65/188 (34.57%), Postives = 99/188 (52.66%), Query Frame = 3
Query:   27 GIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVN-APKCPHRNNHYDG 587
            G P+ Y + E    ++F LV  NGK      HW+P  G   L   EEA +       +  ++L++SI      + +L IQ++  +++ +  F+  +VTK     ++PL   G+LV NKNI   F E     F PG +V G+ ++ D +LQ R+F+Y DTQ +R GPN   L  N  P+ P  NN+ DG
Sbjct:  199 GSPKAYSNTEPNKHRSFRLVTDNGKQFQCSNHWQPLQGFIDL-GVEEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGPNIQQLGFNRPPRAPIHNNNRDG 385          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 60/185 (32.43%), Postives = 88/185 (47.57%), Query Frame = 3
Query:   42 YRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLD---VTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 587
            +RHM G+G  TF LV K+G V+  KF +K   G    +  ++A +V   +  +     + + AAG YP W+L  Q +       F+ DP +    TK  P + +PL     L+LN+N  N FAE E +  +      G     D ++Q R FAY DT    L  +Y  +PV  P     N+  DG
Sbjct:  197 HRHMNGYGSHTFKLVAKDGSVYCSKFWYKADQGQAAEV-WKDAEEVAAEDVDYFRDLNFQAEAAGRYPLWELASQVMT---FSDFEIDPFNENIPTKVVPRESVPLIVDAELLLNRNPLNMFAEVEQVFMDVAAASKGADEVEDPLIQ-RQFAYIDTHLSELTASY-GIPVCRPYATVLNDQEDG 375          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CAT1_PENJA3.269e-2034.57Catalase OS=Penicillium janthinellum PE=1 SV=1[more]
CATA_PENJA2.963e-1332.43Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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