FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 422.55 bits (1085), Expect = 1.291e-117
Identity = 198/267 (74.16%), Postives = 225/267 (84.27%), Query Frame = 3
Query:    3 FSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFD-FDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLXRW 800
            FS+ FDDVGIP DYRHM+G GV T+TLV++ G V YVKFHW+PTCGV+ L+DDE AV+ G +NHSHAT+DL D+IAAGN+PEW LYIQT+DP+ ED+ D  DPLDVTK WPED  PLQPVGRLVLN+NIDNFFAENE LAF PG++VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL+LP NAPKC H NNHYDG MNFMHR EEVDYFPSRYD  R+A RYPIP+  I GRREK  I KENNFKQPGERYR+  P RQERF+ RW
Sbjct:  185 FSFLFDDVGIPADYRHMDGSGVHTYTLVSRAGTVTYVKFHWRPTCGVRSLMDDE-AVRCG-ANHSHATKDLTDAIAAGNFPEWTLYIQTMDPEMEDRLDDLDPLDVTKTWPEDTFPLQPVGRLVLNRNIDNFFAENEQLAFCPGLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCAHHNNHYDGSMNFMHRHEEVDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERYRAMDPARQERFITRW 449          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.735e-59
Identity = 111/256 (43.36%), Postives = 155/256 (60.55%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGR-REKACIEKENNFKQPGERYRSWA 767
            ++ F D G P  YR + G  V  F  +N+ GK  YVK  W P  G+  L  D+ A ++     +HA++DLY++I  G+YPEW LY+Q +DP   D +DF+PLD TK W ED+ P + VG + LN+N DN FAE E + FNPG++VPG+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    Y  P   I G    +   EK NNF    E ++ ++
Sbjct:  177 TYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNLSTDQ-AAQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDNYDFNPLDATKDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVPGMLPSEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSINYEPNSYDTEPKENPAYIEPEQEIRGDISGRLVAEKPNNFGHAKEVWKRYS 431          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 4.666e-59
Identity = 113/262 (43.13%), Postives = 163/262 (62.21%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLXRW 800
            + + G P  YR M+G GV  + LVN  G+VHYVKFHWK   G+K L D +E  +V   ++SH T DL  +I  G++P+W LY+Q + P+   +FDFDPLD TK WP+  +P + +G++VLNKN+DNFF E E +A  P  +VPGI  S D++LQ R+F+Y DTQ +RLG   L LPVN PK    N + DG +N  H    V+Y PSR +P    ++       ++G  ++A I +E NFKQ G+ +RS++   +   + R+
Sbjct:  202 YSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKSLQGIKNL-DPKEVAQVQSKDYSHLTNDLVGAIKKGDFPKWDLYVQVLKPEELAKFDFDPLDATKIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLFRSYSAKEKTDLVQRF 460          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.958e-59
Identity = 114/258 (44.19%), Postives = 156/258 (60.47%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD------PTRHAERYPIPSDVITGRREKACIEKENNF---KQPGERY 755
            + F D G P  YR + G  V  F  +N+ GK  YVK  W P  G+  L   E+A ++     +HA++DLY++I  G+YPEW LY+Q +DP   D FDF+PLD TK W ED+ P + VG + LN+N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG+M F  +   ++Y P+ Y+      P    +   I  D I+GR      EK NNF   K+  +RY
Sbjct:  178 YLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNL-STEQAAQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDSFDFNPLDATKDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSINYEPNSYETEPKENPAFIEQEQEIRGD-ISGR---LIAEKPNNFGHAKEVWDRY 430          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.158e-58
Identity = 112/254 (44.09%), Postives = 153/254 (60.24%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACI-EKENNF---KQPGERY 755
            + F D G P  YR + G  V  F  +N+ GK  YVK  W P  G+  L   E+A ++     +HA++DLY++I  G+YPEW LY+Q +DP   D FDF+PLD TK W ED+ P + VG + L++N DN FAE E + FNPG++V G+  S D++LQ R+F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    +  P   I G      I EK NNF   K+  +RY
Sbjct:  178 YLFSDEGTPASYREVRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNL-STEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDSFDFNPLDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRY 430          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.737e-58
Identity = 114/255 (44.71%), Postives = 156/255 (61.18%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQ 779
            + + G P  YR M+G  V  + LVN  G+VHYVKFHWK   G K L D ++  +V G ++SH T DL  +I  G++P+W LYIQ + P+   +FDFDPLD TK WP   IP + +G++VLN+N+DNFF E E +A  P  +VPGI  S D++LQ R+FAY DTQ +R+G N L LPVN P+      + DG +N  H    V+Y PSR DP             ++G  ++A I++E NFKQ GE +RS+    Q
Sbjct:  205 YSNEGTPASYREMDGNSVHAYKLVNARGEVHYVKFHWKSLQGQKNL-DPKQVAEVQGRDYSHMTNDLVSAIRKGDFPKWDLYIQVLKPEDLAKFDFDPLDATKIWPG--IPERKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQ 456          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.405e-55
Identity = 112/253 (44.27%), Postives = 157/253 (62.06%), Query Frame = 3
Query:   27 GIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM-----NFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWA 767
            GIP  YR M+G GV T+  VN  G+   VK+HW+P  GV+ L    +A +V  +N +HATQDL+D+I  G++P+W L++Q ++     + DFDPLD TK WP +  P + VG++ LN+N +N FAE E  AF  G++V G+ +S+DKMLQ R F+Y DTQR+R+GPNYL LP+NAPK     N  DG M      F  +D+ V+Y PS    P     R P  +  + G   +A IE+ N F Q G +YR++A
Sbjct:  215 GIPASYRFMQGSGVNTYKWVNDQGEGVLVKYHWEPVQGVRNLTQ-MQADEVQATNFNHATQDLHDAIERGDFPQWDLFVQIMEDGEHPELDFDPLDDTKIWPREQFPWRHVGQMTLNRNPENVFAETEQAAFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFGQAGMQYRNFA 466          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.553e-54
Identity = 100/195 (51.28%), Postives = 135/195 (69.23%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 590
            W   D  IP+ +R MEGFGV TF  VN+ GK H+VKFHWKP  G+  L+ DE A K+ G +     +DL++SI  G+YPE++L +Q I  + E  FDFD LD TK WPE+ +P++ +G++ LN+N+DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  LP+N P CP  NN  DG+
Sbjct:  202 WAMSDRSIPRSFRMMEGFGVHTFRFVNEEGKAHFVKFHWKPVLGIHSLVWDE-AQKIAGKDPDFHRRDLWESIENGDYPEYELGVQLISEEDEFNFDFDVLDPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGY 395          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.519e-54
Identity = 109/257 (42.41%), Postives = 160/257 (62.26%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFM-----HRDEEVDYFPSRYDPTRHAER-YPIPSDVITGRREKACIEKENNFKQPGERYR 758
            ++ F   GIP +YR M+G GV  +  VN+ GK   VK+H++P  G++ L   +EA ++ G N +HATQDLYD+I  G+YPEW++Y Q +  D   + DFDPLD TK W +D  P +P+G+LVLNKN +N+ AE E  +F  G++V G+ +S+DK+LQ R FAY DTQR+R+G NYL LP+N+PK     N   G M +       ++  V+Y PS     + A++     +  + G  ++  I++ NNF Q GE YR
Sbjct:  210 TFLFSPWGIPANYRQMQGSGVHAYKWVNEEGKAVLVKYHFEPKQGIRNLTQ-KEAEEIQGKNFNHATQDLYDAIENGDYPEWEVYAQIMSDDEHPELDFDPLDPTKLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQAGETYR 465          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 7.708e-54
Identity = 100/195 (51.28%), Postives = 135/195 (69.23%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 590
            W   D GIP+ YR MEGFGV TF  VN+ GK  +VKFHWKP  GV  L+ DE A K+ G +     +DL+++I  G   E++L +Q ID + E +FDFD LD TK WPE+++P++ +G++ LN+N DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP  NN YDG+
Sbjct:  205 WTMSDRGIPRSYRMMEGFGVHTFRFVNEQGKARFVKFHWKPVLGVHSLVWDE-AQKIAGKDPDFHRRDLWETIENGGKVEYELGVQMIDEEDEFKFDFDILDPTKLWPEELVPVKIIGKMTLNRNQDNVFAETEQVAFHPGNVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHEIPINRPVCPFHNNQYDGY 398          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA2_MAIZE1.291e-11774.16Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA_LISSE2.735e-5943.36Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATB_PSESY4.666e-5943.13Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_LISIN7.958e-5944.19Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISMO5.158e-5844.09Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATB_PSEAE6.737e-5844.71Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_DEIRA1.405e-5544.27Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATE_BACPF1.553e-5451.28Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATX_BACSU4.519e-5442.41Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATE_BACSU7.708e-5451.28Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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