FC873562

Overview
NameFC873562
Unique NameFC873562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.009e-45
Identity = 94/243 (38.68%), Postives = 143/243 (58.85%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREKACIEKENNFKQP 743
            D GIP  YRHM GFG  T++ +N   +  +VKFH+K   G+K L + E A  +     SH  +DLY++I   ++P+WK+ +Q +     ++  F+P D+TK WP  ++PL  +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF  ++++   Y P+ YD + +  + Y  P  V+ G  ++      + + QP
Sbjct:  178 DRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGIKNLTNQEAAELIAKDRESHQ-RDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLEGVAQRYAPLDNDFYTQP 419          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 183.726 bits (465), Expect = 1.009e-45
Identity = 99/258 (38.37%), Postives = 146/258 (56.59%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFL 791
            D GIP   RHM GFG  TF   N  G+  ++K+H+K   GVK L D   A K+ G N  + T+DL+++I  G+YP WKLY+Q +  +  + + FDP DVTK W +   PL  VGR+VL++N +N+FAE E   F+PG +VPGI  S DKMLQ R+FAY D  R+R+G N+  LP+N  +    N   DG M F  +    V Y P+ +   + +      +  + G  +    +  +++ Q G+ YR  + D + R +
Sbjct:  181 DRGIPATLRHMHGFGSHTFKWTNAEGEGVWIKYHFKTEQGVKNL-DVNTAAKIAGENPDYHTEDLFNAIENGDYPAWKLYVQIMPLEDANTYRFDPFDVTKVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRFDDNGGGSVYYEPNSFGGPKESPEDKQAAYPVQGIADSVSYDHYDHYTQAGDLYRLMSEDERTRLV 437          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.721e-45
Identity = 98/233 (42.06%), Postives = 138/233 (59.23%), Query Frame = 3
Query:    9 WFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDG-FMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGR 698
            W     GIP+ YRHM+GFG+ TF LV ++GK   VK+HWK   G   L+  EEA  + G N     QDL+D+I +GN P W+L +Q ID D    + FD LD TK+ PE+  PLQ +G + LN+N  N+FAE E ++F PG +V G+ ++ D +LQ R+++Y DTQ  RHR GPN+  LP+N P     NNH DG    ++H++         Y P+   + YP  ++   GR
Sbjct:  229 WAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTKQGKAALVW-EEAQVLAGKNADFHRQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFDLLDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVRGVDFTEDPLLQGRLYSYLDTQLNRHR-GPNFEQLPINRPVSGVHNNHRDGQGQAWIHKNIH------HYSPSYLNKGYPAQANQTVGR 453          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.248e-45
Identity = 93/219 (42.47%), Postives = 134/219 (61.19%), Query Frame = 3
Query:   15 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAER 665
            F D G P  Y HM G+G  TF L+N  G+  Y KFH+K   G+K L D + A ++  ++  ++ +DLY+ I    +P W +YIQ +  +   +F ++P DVTK W +   PL PVG++VL++N  N+FAE E +AF+P  +VPG+  S DKML  R+F+Y DT RHRLGPNYL +PVN P K    N   DG MN   ++D   +YFP+ ++  +   R
Sbjct:  198 FSDRGTPDGYCHMNGYGSHTFKLINAKGEPIYAKFHFKTDQGIKNL-DVKTADQLASTDPDYSIRDLYNRIKTCKFPSWTMYIQVMTYEQAKKFKYNPFDVTKVWSQKEYPLIPVGKMVLDRNPKNYFAEVEQIAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFNGPQECPR 415          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.248e-45
Identity = 107/267 (40.07%), Postives = 150/267 (56.18%), Query Frame = 3
Query:    6 SWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP---KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY-DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFL 791
            S  F D G P+ YRHM GF   T   VN  GK ++VK H+    G++     EEA K+  ++   AT+DL+++IA G  P WK+ IQ ++ +   ++ F+P DVTK W     PL  +GR+VLN+N +N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT RHRLG NY  +PVN P   K   +N   DGFM    +  +  +Y P+ +  P  H E      DV      +      ++F QPG+ YR  + D + RF+
Sbjct:  177 SILFSDRGTPKSYRHMHGFSSHTLKFVNAQGKPYWVKLHFTSETGIQNYTA-EEAAKMSMNDPDSATRDLFETIAKGGEPAWKVSIQLMEFEDALKYRFNPFDVTKIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFV 442          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
BLAST of FC873562 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 3
Query:   21 DVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQER 785
            D GIP+D RHM GFG  T+++ N +G+  +VKFH++   G++ L D EEA ++  ++   + +DL+++I  G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER
Sbjct:  183 DRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTD-EEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKER 444          
The following BLAST results are available for this feature:
BLAST of FC873562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_CAMJE1.009e-4538.68Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_BACSU1.009e-4538.37Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CAT3_NEUCR1.721e-4542.06Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_DROME2.248e-4542.47Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATA_DICDI2.248e-4540.07Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_STAAW6.541e-4537.08Catalase OS=Staphylococcus aureus (strain MW2) GN=... [more]
CATA_STAAS6.541e-4537.08Catalase OS=Staphylococcus aureus (strain MSSA476)... [more]
CATA_STAAN6.541e-4537.08Catalase OS=Staphylococcus aureus (strain N315) GN... [more]
CATA_STAAM6.541e-4537.08Catalase OS=Staphylococcus aureus (strain Mu50 / A... [more]
CATA_STAAC6.541e-4537.08Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BG05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873562 ID=FC873562; Name=FC873562; organism=Citrus clementina; type=EST; length=800bp
CATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCAC
ATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAA
AGTGCACTATGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTT
TGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCAC
GCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTG
GAAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACT
TTGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTG
CAGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGC
GGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCT
ACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGAT
ACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGC
ACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCA
TGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACT
CGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCG
TGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGA
GATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTANTCGATGG
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