FC873604

Overview
NameFC873604
Unique NameFC873604
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: MRKB_DICDI (Probable serine/threonine-protein kinase MARK-B OS=Dictyostelium discoideum GN=mrkB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 69/211 (32.70%), Postives = 106/211 (50.24%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDT-FEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFG-----HDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER 620
            K L H +I++L D  +E D    C +LE  SG +L   + A   L E+E R    Q+  GLIY +  +  + H DLK  N+L DE G  K++DFG S I++         L S   G+  Y PPE   L +     ++VD+WS G++ Y M+ G+ P+        +  +R+LR +        ++PS   +S++ KDLI R +     ER
Sbjct:  115 KRLKHDNIIQLHDAIYEDDVGRICLILELVSGGELFDYIVARGRLSEKEGRKFFRQMLCGLIYCH--SNMVCHRDLKLENLLVDEDGNLKISDFGYSNIIKPG------NLLSTFCGSPVYAPPEI--LLEKRYNGNEVDIWSMGVILYAMVTGQLPWTLTDGVQVEGMDRLLRGE-------FKYPSHVILSDDVKDLINRMIVAEPVER 308          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: KKCC2_RAT (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Rattus norvegicus GN=Camkk2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDTFEI-DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 659
            K L H ++V+L +  +  +++    V E  +   +  V    P L E +AR     + +G+ YL+   QKIIH D+KP N+L  E G  K+ DFG+S    +  GS    L S   GT  ++ PE    ++       +DVW+ G+  Y  +FG+ PF      ERI+   + IK++ +EFP +P ++ + KDLI R L  N   R  V  +   P++T
Sbjct:  240 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVS---NEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF----MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 446          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: KKCC2_MOUSE (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Mus musculus GN=Camkk2 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDTFEI-DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 659
            K L H ++V+L +  +  +++    V E  +   +  V    P L E +AR     + +G+ YL+   QKIIH D+KP N+L  E G  K+ DFG+S    +  GS    L S   GT  ++ PE    ++       +DVW+ G+  Y  +FG+ PF      ERI+   + IK++ +EFP +P ++ + KDLI R L  N   R  V  +   P++T
Sbjct:  241 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVS---NEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF----MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 447          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: KKCC2_HUMAN (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Homo sapiens GN=CAMKK2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDTFEI-DQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 659
            K L H ++V+L +  +  +++    V E  +   +  V    P L E +AR     + +G+ YL+   QKIIH D+KP N+L  E G  K+ DFG+S    +  GS    L S   GT  ++ PE    ++       +DVW+ G+  Y  +FG+ PF      ERI+   + IK++ +EFP +P ++ + KDLI R L  N   R  V  +   P++T
Sbjct:  241 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVS---NEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF----MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 447          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: PLK2_RAT (Serine/threonine-protein kinase PLK2 OS=Rattus norvegicus GN=Plk2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 71/210 (33.81%), Postives = 104/210 (49.52%), Query Frame = 3
Query:    3 HKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQG-AGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDV 629
            H+ L H H+V+ +  FE  +N +  +LEYCS + +  +LKA  VL E E R  + QI  GL YL++  Q+I+H DLK GN   +E    KV DFGL+  +E       +E   +   GT  YL PE            + D+W+ G + Y ML GR PF      E    ++T    R+  +    ++   AK LI   L+ N  +RP +
Sbjct:  131 HRILHHKHVVQFYHYFEDKENIYI-LLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHE--QEILHRDLKLGNFFINEAMELKVGDFGLAARLEP------LEHRRRTICGTPNYLSPEVLNKQGH---GCESDIWALGCVMYTMLLGRPPF------ETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSL 322          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: PLK2_PONAB (Serine/threonine-protein kinase PLK2 OS=Pongo abelii GN=PLK2 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 71/210 (33.81%), Postives = 104/210 (49.52%), Query Frame = 3
Query:    3 HKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQG-AGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDV 629
            H+ L H H+V+ +  FE  +N +  +LEYCS + +  +LKA  VL E E R  + QI  GL YL++  Q+I+H DLK GN   +E    KV DFGL+  +E       +E   +   GT  YL PE            + D+W+ G + Y ML GR PF      E    ++T    R+  +    ++   AK LI   L+ N  +RP +
Sbjct:  134 HRILHHKHVVQFYHYFEDKENIYI-LLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHE--QEILHRDLKLGNFFINEAMELKVGDFGLAARLEP------LEHRRRTICGTPNYLSPEVLNKQGH---GCESDIWALGCVMYTMLLGRPPF------ETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSL 325          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: PLK2_MOUSE (Serine/threonine-protein kinase PLK2 OS=Mus musculus GN=Plk2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 71/210 (33.81%), Postives = 104/210 (49.52%), Query Frame = 3
Query:    3 HKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQG-AGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDV 629
            H+ L H H+V+ +  FE  +N +  +LEYCS + +  +LKA  VL E E R  + QI  GL YL++  Q+I+H DLK GN   +E    KV DFGL+  +E       +E   +   GT  YL PE            + D+W+ G + Y ML GR PF      E    ++T    R+  +    ++   AK LI   L+ N  +RP +
Sbjct:  131 HRLLHHKHVVQFYHYFEDKENIYI-LLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHE--QEILHRDLKLGNFFINEAMELKVGDFGLAARLEP------LEHRRRTICGTPNYLSPEVLNKQGH---GCESDIWALGCVMYTMLLGRPPF------ETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSL 322          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: PLK2_HUMAN (Serine/threonine-protein kinase PLK2 OS=Homo sapiens GN=PLK2 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 71/210 (33.81%), Postives = 104/210 (49.52%), Query Frame = 3
Query:    3 HKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQG-AGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDV 629
            H+ L H H+V+ +  FE  +N +  +LEYCS + +  +LKA  VL E E R  + QI  GL YL++  Q+I+H DLK GN   +E    KV DFGL+  +E       +E   +   GT  YL PE            + D+W+ G + Y ML GR PF      E    ++T    R+  +    ++   AK LI   L+ N  +RP +
Sbjct:  134 HRILHHKHVVQFYHYFEDKENIYI-LLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHE--QEILHRDLKLGNFFINEAMELKVGDFGLAARLEP------LEHRRRTICGTPNYLSPEVLNKQGH---GCESDIWALGCVMYTMLLGRPPF------ETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSL 325          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: KKCC1_MOUSE (Calcium/calmodulin-dependent protein kinase kinase 1 OS=Mus musculus GN=Camkk1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 62/174 (35.63%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  138 PEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 659
            PE +AR+ +  I  GL YL+   QKI+H D+KP N+L  + G  K+ DFG+S   E +         S  AGT  ++ PE    S        +DVW+ G+  Y  ++G+ PF  D     IL     IK   V FP  P VS + KDLI R L  N   R  V  +   P++T
Sbjct:  248 PEEQARLYLRDIILGLEYLH--CQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQ-----LSSTAGTPAFMAPEAISDSGQSFSGKALDVWATGVTLYCFVYGKCPFIDDY----ILTLHRKIKNEAVVFPEEPEVSEDLKDLILRMLDKNPETRIGVSDIKLHPWVT 410          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: KKCC1_RAT (Calcium/calmodulin-dependent protein kinase kinase 1 OS=Rattus norvegicus GN=Camkk1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 61/174 (35.06%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  138 PEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLT 659
            PE +AR+ +  I  GL YL+   QKI+H D+KP N+L  + G  K+ DFG+S   E +         S  AGT  ++ PE    +        +DVW+ G+  Y  ++G+ PF      E IL     IK   V FP  P VS E KDLI + L  N   R  V  +   P++T
Sbjct:  248 PEEQARLYLRDIILGLEYLH--CQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQ-----LSSTAGTPAFMAPEAISDTGQSFSGKALDVWATGVTLYCFVYGKCPF----IDEYILALHRKIKNEAVVFPEEPEVSEELKDLILKMLDKNPETRIGVSDIKLHPWVT 410          
The following BLAST results are available for this feature:
BLAST of FC873604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRKB_DICDI3.781e-1932.70Probable serine/threonine-protein kinase MARK-B OS... [more]
KKCC2_RAT3.781e-1931.96Calcium/calmodulin-dependent protein kinase kinase... [more]
KKCC2_MOUSE3.781e-1931.96Calcium/calmodulin-dependent protein kinase kinase... [more]
KKCC2_HUMAN3.781e-1931.96Calcium/calmodulin-dependent protein kinase kinase... [more]
PLK2_RAT4.939e-1933.81Serine/threonine-protein kinase PLK2 OS=Rattus nor... [more]
PLK2_PONAB4.939e-1933.81Serine/threonine-protein kinase PLK2 OS=Pongo abel... [more]
PLK2_MOUSE4.939e-1933.81Serine/threonine-protein kinase PLK2 OS=Mus muscul... [more]
PLK2_HUMAN4.939e-1933.81Serine/threonine-protein kinase PLK2 OS=Homo sapie... [more]
KKCC1_MOUSE4.939e-1935.63Calcium/calmodulin-dependent protein kinase kinase... [more]
KKCC1_RAT6.450e-1935.06Calcium/calmodulin-dependent protein kinase kinase... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DC06FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DC06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873604 ID=FC873604; Name=FC873604; organism=Citrus clementina; type=EST; length=821bp
TTCACAAGACCTTGGTGCATCATCACATCGTTCGGCTTTGGGACACTTTT
GAGATTGACCAGAACACATTCTGCACCGTATTAGAGTATTGCAGTGGAAA
GGATCTTGACGCTGTTCTAAAAGCAACACCTGTGTTGCCCGAGAGGGAAG
CTAGGATAATCATTGTTCAGATATTTCAGGGCCTTATATACTTGAACAAA
AGAGCACAGAAGATTATCCATTATGATCTGAAACCTGGAAATGTCCTATT
TGATGAATTTGGTGTTGCAAAAGTGACTGATTTTGGGCTTAGCAAGATAG
TAGAGGACGATGTTGGATCCCAGGGTATGGAACTTACATCCCAGGGAGCT
GGAACGTATTGGTACCTGCCCCCAGAGTGCTTTGAGCTCAGCAAGACTCC
ACTTATTTCATCAAAGGTGGATGTTTGGTCTGCTGGTATTCTATTTTACC
AAATGCTCTTTGGTCGACGTCCTTTTGGGCATGATCAAACCCAAGAACGA
ATACTACGTGAGGACACAATTATCAAAGCACGTAAGGTTGAATTCCCTTC
AAGACCTGCTGTCTCAAATGAGGCAAAGGATTTAATTCGAAGATGTCTAA
CGTATAACCAGGCTGAGAGGCCCGATGTGTTAACTCTTGCTCAAGACCCC
TATCTTACATACTCCAAAAAGTAATAGTTAATATTTATCATACAGAGACA
CAGCTTAAGGGATCTCCGAGCAGGAAGGTGGATATTTTCTTTTTGGCAAA
CATAGAATTGAGACGATCTTATTGCTATCTCAAAATGGAATTTTTTAAAA
AAAAAAAAAAAAAAAAAAAAA
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