FC873604

Overview
NameFC873604
Unique NameFC873604
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 68/202 (33.66%), Postives = 90/202 (44.55%), Query Frame = 3
Query:   18 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDL-DAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER 620
            H H+V L +        +   +EY  G +L D V K    L E  AR    Q+   + Y + R   + H DLKP N+L DE G  K++DFGLS + E     Q   L     GT  Y+ PE   + K     +K DVWS G++ Y +L G  PF H+Q    + R     K  K EF        E K L+ R L  N   R
Sbjct:   69 HPHVVFLHEVMASKTKIYFA-MEYVKGGELFDKVSKGK--LKENIARKYFQQLIGAIDYCHSRG--VYHRDLKPENLLLDENGDLKISDFGLSALRE---SKQQDGLLHTTCGTPAYVAPEV--IGKKGYDGAKADVWSCGVVLYVLLAGFLPF-HEQNLVEMYR-----KITKGEFKCPNWFPPEVKKLLSRILDPNPNSR 254          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 64/214 (29.91%), Postives = 96/214 (44.86%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDL-DAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQ 644
            K + H +IV+L++        +  VLEY  G +L + V K    L E  AR    Q+   + + + R   + H DLKP N+L DE G  K+TDFGLS + E       +  T    GT  Y+ PE   +S+      KVD WS G++ + ++ G  PF      E         K  K EF      S++ + L+ R L  N   R  +  + +
Sbjct:   68 KLVRHPNIVQLYEVMATKSKIYF-VLEYVKGGELFNKVAKGR--LKEDAARKYFQQLVSAVDFCHSRG--VYHRDLKPENLLVDENGNLKITDFGLSALAESRRQDGLLHTT---CGTPAYVAPEV--ISRKGYDGVKVDTWSCGVILFVLMAGYLPFQDSNLMEMYR------KIGKAEFKCPAWFSSDVRKLVSRILDPNPRSRMPITKIME 265          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 62/201 (30.85%), Postives = 93/201 (46.27%), Query Frame = 3
Query:   18 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER 620
            H ++++L++        +  VLEY  G +L   +     L E  AR    Q+   + Y + R   + H DLKP N+L DE    KV+DFGLS + E       +  T    GT  Y+ PE   LS+     +K DVWS G++ + ++ G  PF HD     + R     K  + +F      S E KDLI + L  + + R
Sbjct:   69 HPNVLQLFEVMASKSKIYF-VLEYAKGGELFNKIAKEGKLSEDSARRYFHQLINAVDYCHSRG--VYHRDLKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTT---CGTPAYVAPEV--LSRKGYDGAKADVWSCGVILFVLVAGYLPF-HDPNLIEMYR-----KICRADFRCPRYFSAELKDLIHKILDSDPSTR 255          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 65/216 (30.09%), Postives = 98/216 (45.37%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPY 653
            + L H +IV+L +        F   +E+  G +L   +     L E  +R    Q+   + Y + R   + H DLKP N+L DE G  KV+DFGLS +  D +   G+  T    GT  Y+ PE   LSK     +KVDVWS GI+ + ++ G  PF            +   K  K E+     +S + K  + R L  N   R  +  + +DP+
Sbjct:   75 RRLSHPNIVKLHEVMATKSKIFFA-MEFVKGGELFNKISKHGRLSEDLSRRYFQQLISAVGYCHARG--VYHRDLKPENLLIDENGNLKVSDFGLSALT-DQIRPDGLLHTL--CGTPAYVAPEI--LSKKGYEGAKVDVWSCGIVLFVLVAGYLPFNDPNVM------NMYKKIYKGEYRFPRWMSPDLKRFVSRLLDINPETRITIDEILKDPW 276          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: STK36_HUMAN (Serine/threonine-protein kinase 36 OS=Homo sapiens GN=STK36 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 65/210 (30.95%), Postives = 105/210 (50.00%), Query Frame = 3
Query:   12 LVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER---PDVL 632
            L H +IV + D+FE D+     V +Y  G +L  +L+    LPE + + I  Q+   L YL+  + +I+H D+KP N+L  + G  K+ DFG ++ +  +     M LTS   GT  Y+ PE  E  + P      D+WS G + Y++  G  PF        I +  ++I    V +PS   +S   K+ ++  LT +  +R   PD+L
Sbjct:   58 LRHPNIVHMLDSFETDKEVV-VVTDYAEG-ELFQILEDDGKLPEDQVQAIAAQLVSALYYLH--SHRILHRDMKPQNILLAKGGGIKLCDFGFARAMSTNT----MVLTSI-KGTPLYMSPELVE--ERP-YDHTADLWSVGCILYELAVGTPPF----YATSIFQLVSLILKDPVRWPS--TISPCFKNFLQGLLTKDPRQRLSWPDLL 249          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: PPK24_SCHPO (Serine/threonine-protein kinase ppk24, mitochondrial OS=Schizosaccharomyces pombe GN=ppk24 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 49/136 (36.03%), Postives = 68/136 (50.00%), Query Frame = 3
Query:   69 FCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPF 476
            FC V EYC   DL   ++   VL   +    + QI Q + YL  ++Q+I H DLKP N+L    G+ K+TDFG S+IV +   ++ +   S   G+  YL PE F   +        D WS GIL   +  G  PF
Sbjct:  207 FCLVQEYCPQGDLFKQIEEK-VLTLEDKCCYLKQILQAVAYL--QSQRIAHRDLKPENILIGRDGLLKLTDFGTSEIVGNPGDNESIRFVSGAVGSLAYLAPEAFH--ENEYCGLLADRWSCGILLKVLFTGYFPF 337          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: PEPK2_ARATH (Serine/threonine-protein kinase PEPKR2 OS=Arabidopsis thaliana GN=PEPKR2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 65/220 (29.55%), Postives = 104/220 (47.27%), Query Frame = 3
Query:   18 HHHIVRLWDTFEIDQNTFCTVLEYCSGKDL-DAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQK--IIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSR--PAVSNEAKDLIRRCLTYNQAERPDVLTLAQDPYLTY 662
            H  +V L   +E + + F  V+E CSG  L D ++K      +R A I     F+ L+ +     +  ++H D+KP N+L    G  ++ DFGL+  +       G+      AG+  Y+ PE    +     S KVDVWSAG+L Y +L G  PF  D            IK  K++F +    +VS  A+DL+ R LT  ++ R     + + P++ +
Sbjct:  158 HPRVVTLHAVYE-ESDCFHLVMELCSGGRLIDQMVKVGRYSEQRAANI-----FKDLMLVINYCHEMGVVHRDIKPENILLTAAGKIQLADFGLAMRIAKGQTLSGL------AGSPAYVAPEVLSEN----YSEKVDVWSAGVLLYALLSGVLPFKGDSLDAIF----EAIKNVKLDFNTGVWESVSKPARDLLARMLTREESARITADEVLRHPWILF 357          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: NUAK2_MOUSE (NUAK family SNF1-like kinase 2 OS=Mus musculus GN=Nuak2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 66/213 (30.99%), Postives = 92/213 (43.19%), Query Frame = 3
Query:    9 TLVHHHIV--------RLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPF-GHDQTQERILREDTIIKARKVEFPSRPAVSNEAKDLIRRCLTYNQAER 620
            +L H HI+        RL   FE + +    V+EY S  DL   +   P L ER+AR    QI   L Y ++    I+H DLK  N+L D  G  K+ DFGLS +          +      G+  Y  PE   ++  P +  +VD WS G+L Y ++ G  PF G D          T++K         P   ++A  LIR  L  N   R
Sbjct:  110 SLNHPHIIAIHEVGRSRLVTVFE-NSSKIVIVMEYASRGDLYDYISERPRLSERDARHFFRQIVSALHYCHQNG--IVHRDLKLENILLDANGNIKIADFGLSNLYHKG------KFLQTFCGSPLYASPEI--VNGKPYVGPEVDSWSLGVLLYILVHGTMPFDGQD--------HKTLVKQISNGAYREPPKPSDACGLIRWLLMVNPTRR 303          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: NEK6_RAT (Serine/threonine-protein kinase Nek6 OS=Rattus norvegicus GN=Nek6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 57/214 (26.64%), Postives = 99/214 (46.26%), Query Frame = 3
Query:    6 KTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLK----ATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPA--VSNEAKDLIRRCLTYNQAERPDV 629
            K L H +I++  D+F I+ N    VLE     DL  ++K       ++PER      VQ+   + +++ R  +++H D+KP NV     G+ K+ D GL +    +  +          GT +Y+ PE    +     + K D+WS G L Y+M   + PF  D+     L +    K  + ++P  P    S + ++L+  C+  +   RPD+
Sbjct:   98 KQLNHPNIIKYLDSF-IEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR--RVMHRDIKPANVFITATGIVKLGDLGLGRFFSSETTA-----AHSLVGTPYYMSPERIHENG---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQ----KIEQCDYPPLPGEHYSEKLRELVSMCIYPDPNHRPDI 296          
BLAST of FC873604 vs. ExPASy Swiss-Prot
Match: MAST1_RAT (Microtubule-associated serine/threonine-protein kinase 1 OS=Rattus norvegicus GN=Mast1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 56/167 (33.53%), Postives = 77/167 (46.11%), Query Frame = 3
Query:   27 IVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPVLPEREARIIIVQIFQGLIYLNKRAQKIIHYDLKPGNVLFDEFGVAKVTDFGLSK---------IVEDDVGSQGME-LTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQE 497
            +V ++ +FE  ++  C V+EY  G D   +LK    LP   AR+   +    L YL+     I+H DLKP N+L    G  K+TDFGLSK         + E  +     E L  Q  GT  Y+ PE             VD W+ GI+ Y+ L G  PF  D  +E
Sbjct:  436 VVGMFCSFETRRH-LCMVMEYVEGGDCATLLKNIGALPVEMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKMGLMSLTTNLYEGHIEKDAREFLDKQVCGTPEYIAPEVILRQG---YGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 596          
The following BLAST results are available for this feature:
BLAST of FC873604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKK_ARATH2.374e-1333.66CBL-interacting serine/threonine-protein kinase 20... [more]
CIPKI_ORYSJ2.374e-1329.91CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPKB_ORYSJ2.374e-1330.85CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKB_ARATH2.374e-1330.09CBL-interacting serine/threonine-protein kinase 11... [more]
STK36_HUMAN3.101e-1330.95Serine/threonine-protein kinase 36 OS=Homo sapiens... [more]
PPK24_SCHPO3.101e-1336.03Serine/threonine-protein kinase ppk24, mitochondri... [more]
PEPK2_ARATH3.101e-1329.55Serine/threonine-protein kinase PEPKR2 OS=Arabidop... [more]
NUAK2_MOUSE3.101e-1330.99NUAK family SNF1-like kinase 2 OS=Mus musculus GN=... [more]
NEK6_RAT3.101e-1326.64Serine/threonine-protein kinase Nek6 OS=Rattus nor... [more]
MAST1_RAT3.101e-1333.53Microtubule-associated serine/threonine-protein ki... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DC06FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DC06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873604 ID=FC873604; Name=FC873604; organism=Citrus clementina; type=EST; length=821bp
TTCACAAGACCTTGGTGCATCATCACATCGTTCGGCTTTGGGACACTTTT
GAGATTGACCAGAACACATTCTGCACCGTATTAGAGTATTGCAGTGGAAA
GGATCTTGACGCTGTTCTAAAAGCAACACCTGTGTTGCCCGAGAGGGAAG
CTAGGATAATCATTGTTCAGATATTTCAGGGCCTTATATACTTGAACAAA
AGAGCACAGAAGATTATCCATTATGATCTGAAACCTGGAAATGTCCTATT
TGATGAATTTGGTGTTGCAAAAGTGACTGATTTTGGGCTTAGCAAGATAG
TAGAGGACGATGTTGGATCCCAGGGTATGGAACTTACATCCCAGGGAGCT
GGAACGTATTGGTACCTGCCCCCAGAGTGCTTTGAGCTCAGCAAGACTCC
ACTTATTTCATCAAAGGTGGATGTTTGGTCTGCTGGTATTCTATTTTACC
AAATGCTCTTTGGTCGACGTCCTTTTGGGCATGATCAAACCCAAGAACGA
ATACTACGTGAGGACACAATTATCAAAGCACGTAAGGTTGAATTCCCTTC
AAGACCTGCTGTCTCAAATGAGGCAAAGGATTTAATTCGAAGATGTCTAA
CGTATAACCAGGCTGAGAGGCCCGATGTGTTAACTCTTGCTCAAGACCCC
TATCTTACATACTCCAAAAAGTAATAGTTAATATTTATCATACAGAGACA
CAGCTTAAGGGATCTCCGAGCAGGAAGGTGGATATTTTCTTTTTGGCAAA
CATAGAATTGAGACGATCTTATTGCTATCTCAAAATGGAATTTTTTAAAA
AAAAAAAAAAAAAAAAAAAAA
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