FC873624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.219e-21 Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV +LA CI FL+ GG PP CC GV+++ ++RTT DR+A C CLK A +RGI PN A LP +CG+ IPYKIS ST+C+ + Sbjct: 4 GQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.122e-21 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV+++L+PCI + R G PP CC+GV+ L GAA++T D+QAAC C+K A G+ AAG+PS CG+ +PY IS S DCS++R Sbjct: 30 GQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.061e-20 Identity = 48/88 (54.55%), Postives = 57/88 (64.77%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQVT+ L PC +L GG PP CCNGVR LN AA+TTPDRQ AC CLK I N A LP +CG+ I YKI+P+ DCS++ Sbjct: 29 GQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.061e-20 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV+++L+PCI + R G PP CC+GV+ L GAA++T D+QAAC C+K A G+ AAG+PS CG+ +PY IS S DCS++R Sbjct: 30 GQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.061e-20 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 GQV+++L+PCI + R G PP CC+GV+ L GAA++T D+QAAC C+K A G+ AAG+PS CG+ +PY IS S DCS++R Sbjct: 30 GQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.385e-20 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV ++++PC+ + R GG P CC+GVRSLN AA TT DR+ AC CLK +I G+ AA +PS+CG+ IPY ISPS DCS V Sbjct: 31 GQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.385e-20 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV ++++PC+ + R GG P CC+GVRSLN AA TT DR+ AC CLK +I G+ AA +PS+CG+ IPY ISPS DCS V Sbjct: 30 GQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.385e-20 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV ++++PC+ + R GG P CC+GVRSLN AA TT DR+ AC CLK +I G+ AA +PS+CG+ IPY ISPS DCS V Sbjct: 31 GQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.809e-20 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV+++L+PCI + R G PP CC+GV+ L GAA++T D+QAAC CLK +I+GI +G+P +CG+ +P+ IS STDC++V Sbjct: 30 GQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.363e-20 Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 G+V +LAPC+ +L+ GG P CC GVR+LN AA TTPDRQAAC CLK A +I + N AA LP +C + IPYKIS ST+C+ +R Sbjct: 28 GRVDTALAPCLGYLQ-GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115 The following BLAST results are available for this feature:
BLAST of FC873624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873624 ID=FC873624; Name=FC873624; organism=Citrus clementina; type=EST; length=427bpback to top |