FC873624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.585e-16 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 G VT+S+APC+ ++ P CC+GVR+LNG A ++ DR+ AC CLK + R + AA +PS+CG+ + + IS S DCS++ Sbjct: 33 GDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.070e-16 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV+++L PC + + G P CC+GV+ L G AR+T D+QA C CLK AAG+PS+CG+ +PY IS S DCS++ Sbjct: 30 GQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKS---VAGAYNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.612e-16 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 G VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CG+ IPY IS ST+C + Sbjct: 29 GTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.023e-16 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 3 Query: 54 VTASLAPCIPFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 VT +L PC+ +L+ G PPP CC GVRSL AA+T DR+ AC C+K A + + VAA L SQCG+ + Y +SP+ +C+ V+ Sbjct: 7 VTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.023e-16 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 3 Query: 54 VTASLAPCIPFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 VT +L PC+ +L+ G PPP CC GVRSL AA+T DR+ AC C+K A + + VAA L SQCG+ + Y +SP+ +C+ V+ Sbjct: 7 VTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 54 VTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 VT +L PC+P+LR+GG+ P P CC G + L GA RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 32 VTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.989e-15 Identity = 45/90 (50.00%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TI-RGIKPNVAAGLPSQCGLPIPYKISPSTDCSRVR 314 G V +LA CI +L G CCNGV +L A TTPDRQ AC CL+ A + G+ AAGLPS C + IPYKIS ST+C+ VR Sbjct: 30 GTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 3 Query: 51 QVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 QV LA C+P+L+ GG P P CCNG+ SL AA DRQ AC CLK TI GI + A LP++CG+ I S + DC+ + Sbjct: 33 QVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TIRGIKPNVAAGLPSQCGLPIPYKISPSTDCSRV 311 GQV +SLA CIPFL G P CC GV++L A T+ DR+AAC C+K A IK + A+ LP +CG+ I IS +T+C + Sbjct: 4 GQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of FC873624 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 48 GQVTASLAPCIPFLRTGG-RFPPPPCCNGVRSLNGAARTTPDRQAACICLKRAY*TI-RGIKPNVAAGLPSQCGLPIPY--KISPSTDCS 305 G+V ++L PC +L GG P P CCNGVR LNG TT DR+ AC C+K A + G+ + AAG+P +CG+ IPY +I +T C+ Sbjct: 30 GEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119 The following BLAST results are available for this feature:
BLAST of FC873624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873624 ID=FC873624; Name=FC873624; organism=Citrus clementina; type=EST; length=427bpback to top |