FC873625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_GRAFK (Elongation factor G OS=Gramella forsetii (strain KT0803) GN=fusA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 3 Query: 93 VDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPR---LLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHW 557 VD+ KG + E SV GF+ A K G LA G + V L + H + + AK +LEP+ VE+ PE+ +G I LN++RG V R G + IKA +P+ E FG+ +TLR +SG+A F H+ Sbjct: 532 VDVIKGGRIPKEFVPSVEKGFKEAMKNGPLA-----GFTMDSLKVTLKDGSFHPVDSDQLSFELAAKMGYKDAAKKAGAVILEPIMKVEVVTPEENMGDIVGDLNRRRGQVNNMSDRSGAKV--IKAEVPLSEMFGYVTTLRTLSSGRATSTMEFSHY 682
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG1_BURPS (Elongation factor G 1 OS=Burkholderia pseudomallei GN=fusA1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 55/184 (29.89%), Postives = 86/184 (46.74%), Query Frame = 3 Query: 105 KGVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-----DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHV--FEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQL 608 KG ++L+EIK V+ G + K G LA + + + DV + +A G A R AKP LLEP+ VE++ PE +G + L+ +RG V E++ G L ++A +P+ E FG+S++LR+AT G+A F H+ S+ E A Q+ Sbjct: 527 KGYEFLDEIKGGVIPREFIPAVNKGIEETLKSGVLAGYPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMR-------RAKPVLLEPMMAVEVETPEDFMGNVMGDLSSRRGIVQGMEDIAGGGGKL--VRAEVPLAEMFGYSTSLRSATQGRATYTMEFKHYAETPSNVSEAVINAKQV 701
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG1_BURMA (Elongation factor G 1 OS=Burkholderia mallei GN=fusA1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 55/184 (29.89%), Postives = 86/184 (46.74%), Query Frame = 3 Query: 105 KGVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-----DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHV--FEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQL 608 KG ++L+EIK V+ G + K G LA + + + DV + +A G A R AKP LLEP+ VE++ PE +G + L+ +RG V E++ G L ++A +P+ E FG+S++LR+AT G+A F H+ S+ E A Q+ Sbjct: 527 KGYEFLDEIKGGVIPREFIPAVNKGIEETLKSGVLAGYPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMR-------RAKPVLLEPMMAVEVETPEDFMGNVMGDLSSRRGIVQGMEDIAGGGGKL--VRAEVPLAEMFGYSTSLRSATQGRATYTMEFKHYAETPSNVSEAVINAKQV 701
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_STRS7 (Elongation factor G OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 309 TAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD 560 TA+P +LEP+ LV I APE LG + + +RG V + M+ GT ++AY+P+ E FG+++ LR+AT G+ VFDH++ Sbjct: 594 TAQPAILEPMMLVTITAPEDNLGDVMGHVTARRGRV-DGMEAHGTSQI-VRAYVPLAEMFGYATVLRSATQGRGTFMMVFDHYE 675
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_STREM (Elongation factor G OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 309 TAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD 560 TA+P +LEP+ LV I APE LG + + +RG V + M+ GT ++AY+P+ E FG+++ LR+AT G+ VFDH++ Sbjct: 594 TAQPAILEPMMLVTITAPEDNLGDVMGHVTARRGRV-DGMEAHGTSQI-VRAYVPLAEMFGYATVLRSATQGRGTFMMVFDHYE 675
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_STRE4 (Elongation factor G OS=Streptococcus equi subsp. equi (strain 4047) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 309 TAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD 560 TA+P +LEP+ LV I APE LG + + +RG V + M+ GT ++AY+P+ E FG+++ LR+AT G+ VFDH++ Sbjct: 594 TAQPAILEPMMLVTITAPEDNLGDVMGHVTARRGRV-DGMEAHGTSQI-VRAYVPLAEMFGYATVLRSATQGRGTFMMVFDHYE 675
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_CHLP8 (Elongation factor G OS=Chlorobaculum parvum (strain NCIB 8327) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11 Identity = 49/155 (31.61%), Postives = 78/155 (50.32%), Query Frame = 3 Query: 105 KGVQYLNEIKD---------SVVAGFQWASKEGALAEENMRGICFEVCDVVLH----ADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 530 KG ++++EIK SV AG Q A K+G +A M+ + + D H ++ + G + + A P LLEP+ VE+ PE+ LG + L+ +RGH+ +R G +KA +P+ E FG+S+TLR+ T G+A Sbjct: 528 KGYEFVDEIKGGAIPKEYIPSVNAGIQQAMKDGVVAGFPMQDVKVALIDGKYHEVDSSEMAFKIAGSI------GFKGAAKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEGMGERAGAQF--VKAKVPLSEMFGYSTTLRSMTQGRA 674
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_CAMC5 (Elongation factor G OS=Campylobacter curvus (strain 525.92) GN=fusA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11 Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 93 VDMCKGVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP---TARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD 560 ++ G +++N+IK VV G + A + G LA G E V L+ + H + A A P +LEP+ VE++ PE+ +G + LN++RG V +R G+ + I A+ P+ + FG+S+ LR+ T G+A FDH++ Sbjct: 516 LEPASGFEFVNDIKGGVVPKEYIPAVEKGCREALQNGVLA-----GYPVEDVKVTLYDGSYHEVDSSEMAFKLAASMGFKEGARKANPVILEPMMKVEVETPEEYMGDVIGDLNKRRGQVSSMDERNGSKI--ITAFCPLAQMFGYSTDLRSGTQGRATYSMEFDHYE 676
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EFG_BACTN (Elongation factor G OS=Bacteroides thetaiotaomicron GN=fusA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11 Identity = 49/188 (26.06%), Postives = 88/188 (46.81%), Query Frame = 3 Query: 30 DKDLAKKIWCFGPETIGPNMVVDMCKGVQ--YLNEIKDSVVAGFQWASKEGALAEENMRGI-----CFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSS 572 D+D + F E G N+ + VQ + + +K+ V+AG+ S + L + + + FE+C + + +A + G P L+EP+ +E+ PE+ +G + LN++RG V E M+ + +KA +P+ E FG+ + LR TSG+A V+ H +S+ Sbjct: 521 DEDFKEGGLQFIDEVKGGNIPKEFIPSVQKGFTSAMKNGVLAGYPLDSMKVTLIDGSFHPVDSDQLSFEICAIQAYKNACAKAG-------------------PVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQV-EGMESSRSGARIVKAMVPLAEMFGYVTALRTITSGRATSSMVYSHHAQVSN 688 The following BLAST results are available for this feature:
BLAST of FC873625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873625 ID=FC873625; Name=FC873625; organism=Citrus clementina; type=EST; length=656bpback to top |