FC873625

Overview
NameFC873625
Unique NameFC873625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 84/213 (39.44%), Postives = 121/213 (56.81%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            KIL E+ GWD D A+ IW         N++VD   G+QYL EI+D +V GF+WA + G LA+E MRG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P LLEP+  ++I+     +G + SVLN+ RG + +  Q+    +  ++A LPV+ESF  S  LRAA +G+ F    F  W         P S     V   RKKKG +
Sbjct:  525 KILREKAGWDTDEARGIWAIDDRYF--NVIVDKTTGIQYLREIRDYIVQGFRWAMEAGPLAQEPMRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAVLSARPTLLEPLVRLDIKVAPDYIGSVTSVLNKHRGKILDMTQQ--EYMAYLRAELPVLESFTISDELRAAAAGKIFWSMQFARWAPY------PESMLVDFVKQLRKKKGLK 727          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35
Identity = 79/213 (37.09%), Postives = 121/213 (56.81%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            KIL E+ GWD D A+ +W         N++VD   G+QYL EI+D ++ GF+WA + G LA+E +RG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P +LEP+  ++I+     +G + SV+N+ RG + +  Q+       ++A LPV+ESF  S  LRAA +G+ F    F  W         P S  +  V   RKKKG +
Sbjct:  525 KILREKAGWDTDEARGVWAIDDRYF--NVIVDKTTGIQYLREIRDYIIQGFRWAMEAGPLAQEPIRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAFLSARPTILEPLVRLDIKVAPDYIGAVTSVINKHRGKILDMTQQEYMAF--LRAELPVLESFTISDELRAAAAGKIFWSMQFSRWAPY------PESMLADFVKQLRKKKGLK 727          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            KIL E+ GWD D A++I          NM+VDM  GVQYL EIKD+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTAKP +LEP+  ++I+ P + +G I +V+ +KRG + E  Q   +    + A +PV ESF  +  LR  T+G+A     F  W  +      P S    LV   R +KG +
Sbjct:  521 KILREQAGWDADEARRIMAIDENL---NMLVDMTTGVQYLREIKDTVIQGFRLAMKEGPLAMEPVRGVKVVLHDAVVHEDPAHRGPAQIFPAVRNAIFAGFLTAKPTILEPILKLDIRTPMEYIGNISTVITKKRGKLIEVQQMETSA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PESMLMDLVSKIRTRKGLK 722          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34
Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635
            +IL+++ GWD + A+KIW         N+ VD   GVQYL E+KD+++AGF+ A KEG LA E +RG+   + D V+H D +HRG GQ+ P  R  I+A  L  +P LLEP+  ++I+AP + L  I +VL +KRG +   ++  G  +  I A +PV ESF  +  LR+AT+G+AF    F  W  +      P      L+   R++KG
Sbjct:  523 RILADKAGWDYNEARKIWAIDENI---NVFVDKTAGVQYLREVKDTIIAGFRLALKEGPLAAEPVRGVKVVLHDAVIHEDPVHRGPGQLYPAVRNAIWAGILDGRPTLLEPLQKLDIRAPMEYLSNITAVLTRKRGRII-NVETTGV-MARIIAAIPVAESFDLAGELRSATAGRAFWGVEFYGWAPV------PDQMLQDLIAKIRQRKG 722          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34
Identity = 80/213 (37.56%), Postives = 120/213 (56.34%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            KIL E+ GWD D A++I          N+++DM  GVQYL E+KD+++ GF+ A +EG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTA+P +LEP+  ++I++P + +G I SV+ +KRG + E  Q   T    + A +PV ESF  +  LR  T+G+A     F  W  +      P +    L+   R +KG +
Sbjct:  523 KILREQAGWDADEARRIMAIDENL---NILIDMTTGVQYLREVKDTIIQGFRLAMREGPLAMEPVRGVKVVLHDAVIHEDPAHRGPAQIFPAVRNAIFAGFLTARPTILEPILKLDIRSPMEYIGNISSVITKKRGKLIEVQQMETTA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PENMLMDLIAKIRTRKGLK 724          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33
Identity = 76/211 (36.02%), Postives = 118/211 (55.92%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635
            K+L ++  WD D A++IW    E    N+ +D   GVQ+L E+KD+++AG++ A KEG LA+E +RG+   + D V+H D  HRG  Q+ P  R  +YAS LT  P LLEP   ++I+ P + +G +  V+ + RG + E +   G     I A +P+ ESF     LR+ T+G+AF    F  W+ +      P     +L+   R++KG
Sbjct:  526 KVLRDKVNWDADTARRIWAVDEENF--NIFIDKTVGVQHLREVKDTILAGWRLAMKEGPLAKEPVRGVKVILWDAVIHEDPAHRGPAQLYPAVRNAVYASMLTDSPTLLEPWQKLDIRVPNEYIGAVTGVITKHRGKILEVIDMGGQA--RIVAAVPIAESFELPMELRSVTAGRAFWGTEFYGWEPV------PDQLLPELIRKIRERKG 726          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32
Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V   R++KG
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKG 723          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32
Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V   R++KG
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKG 723          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32
Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V   R++KG
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKG 723          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32
Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 3
Query:    3 KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635
            KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V   R++KG
Sbjct:  524 KILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKG 723          
The following BLAST results are available for this feature:
BLAST of FC873625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
EF2_PYRAR3.021e-3639.44Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_PYRCJ1.499e-3537.09Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]
EF2_DESMO7.440e-3540.38Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]
EF2_AERPE1.269e-3439.34Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE... [more]
EF2_DESK14.823e-3437.56Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_IGNH44.083e-3336.02Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_SULSO5.895e-3237.44Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY5.895e-3237.44Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN5.895e-3237.44Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM5.895e-3237.44Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CA08FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873625 ID=FC873625; Name=FC873625; organism=Citrus clementina; type=EST; length=656bp
CTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCCAAGAAA
ATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGTGGATAT
GTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTGTTGCTG
GGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAACATGAGG
GGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGCTATCCA
CAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGTCATTTATGCAT
CCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCTACTTGGTGGAA
ATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGTGTTCTTAACCA
GAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGGTACCCCACTTT
ATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTGGATTTTCCAGC
ACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAATGTGTGTTTGA
TCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGGATCCCAGGCTT
CACAACTTGTTTTGGATAATAGGAAAAAGAAGGGTTTTGAAGGAACAGAT
GACCCC
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