FC873625

Overview
NameFC873625
Unique NameFC873625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28
Identity = 72/209 (34.45%), Postives = 116/209 (55.50%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETI-GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            E+G D+D AK +     ET+ G N  +D   G+QYLNE+ + ++ GF+ A +EG LA+E  RG+   + D  +H D +HRG  QVIP  +R IY   L A   LLEP+  + +  P+  +G +   +  +RG + EE+Q+ G  +  IK   PV E FGF++ +R+AT G+A        ++ +      P     Q++ + R++KG +
Sbjct: 1047 EYGMDRDDAKAV-----ETVKGTNFFLDKTVGLQYLNEVMELLIEGFEEAMEEGPLAKEPCRGVKVSLVDAEIHEDPVHRGPAQVIPAIKRAIYGGMLLADTHLLEPMQYIYVTVPQDYMGAVTKEIQGRRGTI-EEIQQEGDTVI-IKGKAPVAEMFGFANDIRSATEGRAIWTTEHAGYERV------PEELEEQIIREIRERKGLK 1242          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28
Identity = 76/206 (36.89%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            G DKD AK +        G NM++DM KG+QYLNE  + ++ G   A   G LA+E ++ +   + DV LH DAIHRG  QVIP  R  I    L A   LLEPV  ++I  P   +G   S +  +RG VF +MQ  G  +  +    PV E FGF+  +R+AT G+A     F  ++++      P +    +V+  RK+KG +
Sbjct:  526 GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELIIEGINEALAGGPLADEPVQNLKMTLTDVKLHEDAIHRGPAQVIPAVRGAIKGGMLIAGDSLLEPVQKIQISVPMDQMGAATSQIQGRRGQVF-DMQSEGDTI-TVVGKAPVAELFGFAGDIRSATEGRAMWNTEFAGFELV------PNNLVKDVVVAIRKRKGLK 719          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.563e-27
Identity = 73/215 (33.95%), Postives = 120/215 (55.81%), Query Frame = 3
Query:    3 KILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            KI+ E  + G D + AK++ C        N++++M +G+ +L+E+K+ ++ GF+ A + G LA E  +G+  ++ D VLH DAIHRG  Q+IP AR  I  + + A P LLEP+  V I  P+  +G     ++ +RG +  +M++ G  +  IKA  PV E FGF+  +R AT G+      F  ++ +  D  E      QL+   R++KG +
Sbjct:  522 KIVQELIKAGMDPEEAKRVMCI----YEGNVLINMTRGIVHLDEVKELIIQGFKEAMRNGPLAAEKCQGVKVKLMDAVLHEDAIHRGPAQMIPAARFGIRDAMMQANPVLLEPMQFVYINTPQDFMGAAMREISNRRGQIL-DMEQEG-DMAIIKAKCPVAEMFGFAGAIRGATQGRCLWSIEFAGYEKVPRDMQE------QLIKQIRERKGLK 724          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.372e-27
Identity = 74/206 (35.92%), Postives = 107/206 (51.94%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            GW+KD AK I     +    N+ +DM KGVQYLNE  + ++ G   A + G LA+E ++ +   + DV LH DAIHRG  QVIP  R  + A  L A   LLEP+  + I  P   +G   S +  +RG V +      T    +   +PV E FGFS  +R+AT G+A     F  ++++      P S    +V+  RK+KG +
Sbjct:  526 GWEKDEAKNI----KDISTTNIFIDMTKGVQYLNETMELILEGLHEALQGGPLADEPVQNMKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLDITSEGDT--ITVVGRVPVAELFGFSGDIRSATEGRAMWNTEFAGFEIV------PNSLVKDVVIAIRKRKGLK 719          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.272e-26
Identity = 57/170 (33.53%), Postives = 102/170 (60.00%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 527
            E G DK+ A+++W    +    N+ ++M +G+QYL+EIK+ ++ GF+ A   G +A+E + G+  ++ D  +H DA+HRG  QV+P  R+ I+ + ++A+P LLEP+  V I  P+  +G     +  +RG +    Q     +  +++ +PV E FGF+  +R+AT G+
Sbjct:  524 EAGMDKEEARRVW----DVYEKNLFINMTRGIQYLDEIKELLMDGFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGR 687          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.272e-26
Identity = 69/208 (33.17%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   15 EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGSQASQLVLDNRKKKG 635
            +E G DKD AKK+W    +    ++ V+  +G+QYL+EIK+ ++ GF+ A  +G LA E   GI   + D  +H DA+HRG  QV+P  R+ +Y + + A+P L+EP+  V I  P+  +G     +  +RG + E  Q     +  I++ +PV E FGF+  +R+A  G    +C+   W   +S     P    +++V + R++KG
Sbjct:  523 QEHGLDKDEAKKVW----DVYKHSIFVNKTRGIQYLDEIKELLMEGFESALDDGPLANEKAMGIKISLMDAKIHEDAVHRGPAQVLPAIRKAVYGAIMLAQPTLMEPMQKVYISVPQDYMGAATREVQNRRGQIVEMGQE--GDMSTIESKVPVSEMFGFAGDIRSAAEG----RCI---WSTENSGFERIPRELQNKIVKEIRERKG 717          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.272e-26
Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            G +KD AKKI          N   DM KG+QYLNE  + ++ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +   KA  PV E FGF+  +R+AT G+A     F  ++ +      P S  +++V   RK+KG +
Sbjct:  525 GLNKDEAKKI----VNIFESNAYFDMTKGIQYLNETMELIIEGFTEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQVPQEQMGGATKEIQGRRGVIIDMTSEGDTTVIESKA--PVSELFGFAGDIRSATEGRAMWSTEFAGFEPL------PMSLMTEVVTGIRKRKGLK 718          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.661e-26
Identity = 70/187 (37.43%), Postives = 103/187 (55.08%), Query Frame = 3
Query:   84 NMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGSQASQLVLDNRKKKGFE 641
            N+  D+ KG+QYLNE  + ++ GF+ A + G +A E   GI  ++ D  LH DA+HRG  QVIP  R  I+A+ L AKP LLEP   + I  P+  +G +   +  +RG +  EM+  G  +  I A  PV E FGF+  +R ATSG+A        W    +   L P +   + V++ RK+KG +
Sbjct:  539 NLFCDVTKGIQYLNETMELILEGFREAMRAGPIAREPCMGIKVKLVDCKLHEDAVHRGPAQVIPAVRSAIFAAILQAKPALLEPYQKIFITVPQDMMGAVTREIQGRRGQIL-EMKTEG-DMVTIIAKAPVKEMFGFAGAIRGATSGKAI-------WSTEHAGFELVPQNLFQEFVMEVRKRKGLK 716          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.834e-26
Identity = 76/208 (36.54%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            E G DK+ AK I          N+ +D  KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP +R+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG V   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  +++V   R++KG +
Sbjct:  523 ELGMDKEQAKGI----AGIFNSNIFIDQTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPASRQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-VILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVV------PSSILTEIVGQIRERKGLK 718          
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.701e-26
Identity = 74/206 (35.92%), Postives = 110/206 (53.40%), Query Frame = 3
Query:   24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641
            G DKD AK+I     +    N   DM KG+Q+LNE  + V+ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +   KA  PV E FGF+  +R+AT G+A     F     +  +PL P +  +++V   R++KG +
Sbjct:  525 GLDKDEAKRI----ADIFESNAYFDMTKGIQHLNETMELVLEGFVEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQTPQEQMGGATKEIQGRRGIIIDMTSEGDTTIIESKA--PVSELFGFAGDIRSATEGRAMWSTEF-----VGFEPL-PTNMITEVVSGIRERKGLK 718          
The following BLAST results are available for this feature:
BLAST of FC873625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
EF2_METKA2.318e-2834.45Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_METB63.954e-2836.89Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_METJA2.563e-2733.95Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_METPE4.372e-2735.92Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_METTH1.272e-2633.53Elongation factor 2 OS=Methanobacterium thermoauto... [more]
EF2_METST1.272e-2633.17Elongation factor 2 OS=Methanosphaera stadtmanae (... [more]
EF2_METBU1.272e-2635.92Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_ARCFU1.661e-2637.43Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_METMA2.834e-2636.54Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_METMT3.701e-2635.92Elongation factor 2 OS=Methanococcoides methyluten... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CA08FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873625 ID=FC873625; Name=FC873625; organism=Citrus clementina; type=EST; length=656bp
CTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCCAAGAAA
ATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGTGGATAT
GTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTGTTGCTG
GGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAACATGAGG
GGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGCTATCCA
CAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGTCATTTATGCAT
CCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCTACTTGGTGGAA
ATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGTGTTCTTAACCA
GAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGGTACCCCACTTT
ATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTGGATTTTCCAGC
ACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAATGTGTGTTTGA
TCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGGATCCCAGGCTT
CACAACTTGTTTTGGATAATAGGAAAAAGAAGGGTTTTGAAGGAACAGAT
GACCCC
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