FC873625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24 Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 15 EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 530 +E G DKD ++ I G N+++D KG+Q+LNE + V+ G + A +G LA E ++G + D LH DAIHRG QVIP R ++ S + A +LLEP+ V I P +G + +RG V ++M + G L ++ PV E GFSS +R+AT G+A Sbjct: 522 QEAGMDKDDSQNI----EHIHGTNILLDETKGIQHLNETMELVIEGLEEALDDGPLASEPVQGSLIRLHDARLHEDAIHRGPAQVIPAVREAVHNSLIDASIKLLEPIQQVRIDVPNDHMGAASGEIQGRRGRV-DDMYQEG-DLMVVEGVAPVDEMIGFSSDIRSATEGRA 687
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23 Identity = 62/190 (32.63%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEP 587 E G +K+ AK++ NM+V+M +G+ L+E ++ ++ GF+ + G LA E ++G+ + D H DAIHRG Q+IP R + + AKP LLEP+ V I P+ +G +N +RG + +M++ G + IK+ +PV E FGF+ +R AT G+ F ++ + ++ L+P Sbjct: 530 EAGLEKEQAKRVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP 712
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23 Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 24 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 527 G D++ A+ + C G N++ D+ +G+QYL+E + ++ F G LA E + G+ + D LH D+IHRG QVIP R IY + AK LLEPV V I P++ +G + + Q+RG V E+M + G + ++ A +PV FGF+S +R+AT G+ Sbjct: 527 GIDREEARGLVCVE----GTNIMFDVTRGIQYLDETMELLIEAFTEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRILLEPVQKVFINVPQEEMGSAINEVQQRRG-VIEDMTQEGEEV-SLVARIPVSGMFGFASAIRSATGGK 688
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23 Identity = 68/248 (27.42%), Postives = 107/248 (43.15%), Query Frame = 3 Query: 33 KDLAKKIWCFGPETIGPNMVVDMCKGVQY----------------LNEIKDSVVAGFQWASKEGALAEENMRGICFEV---------------------------------------CDVVLHADAIHRG-----------GGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDP 578 +++ +IW FGP GPN++V+ + Q ++ +S+V+GFQ A+ G + EE + G+CF + C +G GQ+I T + + RL+ +Y +I A LG +Y+VL+++ G V +E + GT ++ IKA LPV ESFGF+ +R TSG A PQ VF HW+++ SDP Sbjct: 817 RNIVDQIWSFGPRKCGPNILVNKSEDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQGASDLAKEGQEENETCSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDP 1064
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23 Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 15 EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 530 +E G DK+ ++ + IG N+ +D KG+Q+LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFSS +R+AT G+A Sbjct: 522 QEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRA 687
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23 Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 15 EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 530 +E G DK+ ++ + IG N+ +D KG+Q+LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFSS +R+AT G+A Sbjct: 522 QEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRA 687
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.901e-22 Identity = 65/208 (31.25%), Postives = 113/208 (54.33%), Query Frame = 3 Query: 18 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKGFE 641 E G +++ AK++ N++++M +G+ L+E ++ ++ GF+ A K G LA E +G+ ++ D V H DAIHRG Q+IP R + + A LLEP+ V I P+ +G L+ +RG + +M++ G + IK+ PV E FGF+ +R AT G+ F ++ + ++ L+P Q+V + R +KG + Sbjct: 530 EIGMNREEAKRVMTI----YEGNVLLNMTRGIVQLDEARELIIEGFKEAVKNGPLAAEKCQGVKVKLMDAVFHEDAIHRGPAQLIPAVRTGVRDAIAQANVGLLEPIQNVYISTPQDYMGDAMKELSNRRGQIL-DMEQEG-DMTTIKSKAPVSEMFGFAGAIRGATQGRCLWSIEFGGFEKVPTE-LQP-----QIVKEIRTRKGLK 725
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.235e-22 Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 48 KIWCFGPETIGPNMVVD-------MCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDV-VLHADAIHRG------------GGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDP 578 K+ FGP +G N+++ + +G E DS+ GFQ A EG LA E ++G+C V V + D I G++I + R I+ + L PR++ +Y +IQ LG +Y+V+ Q+ G + E + GTP + I+A++PVVE+FG S +R TSG A PQ VF ++ + DP Sbjct: 859 KLAGFGPSRVGCNILLSQDNLLGSLFEGTPAAFEYSDSIKNGFQLAVSEGPLANEPVQGMCVLVESVHKMSQDEIESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDWSPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAFGLSEDIRKRTSGAAQPQLVFSGFECIDLDP 1055
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 62/184 (33.70%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 84 NMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDNRKKKG 635 NM DM +G+ ++ E+ D V+ F G +A E G+ ++ D LH DAIHRG GQVIP R I + A L EPV ++ + P +G + +++N +RG + + L IKA +PV E GF+ TLR+ATSG+ V ++ + P Q+V + R++KG Sbjct: 560 NMFFDMTRGIIHIGEVIDMVMDAFMQVMDHGPIAWEPCIGLIVKLTDAQLHEDAIHRGPGQVIPAVREAIKLAMKDAGLVLYEPVQVILVDVPPDYIGDVTALINSRRGAILDIQTEEDRAL--IKAKVPVREMIGFTDTLRSATSGRGVWYLVDQVYEPV------PRELFDQIVREIRQRKG 735
BLAST of FC873625 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 261 GQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDP 578 GQ+I T + + RL+ +Y +I A LG +Y+VL+++ G V +E + GT ++ IKA LPV ESFGF+ +R TSG A PQ VF HW+++ SDP Sbjct: 966 GQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDP 1071 The following BLAST results are available for this feature:
BLAST of FC873625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873625 ID=FC873625; Name=FC873625; organism=Citrus clementina; type=EST; length=656bpback to top |