FC873628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.057e-51 Identity = 97/242 (40.08%), Postives = 144/242 (59.50%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQS-SEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 +L +DYPY DGL +W AI TWV+ Y +Y + + +++D E+QAW+ E VGH D R+A WW ++++ ++L+ +T +IW +SA HA++NFGQY Y GY PNRP L R+ IPDE EF + D KY+ +P T A+V+ LS H+ DE Y+G+RQ S WT D ++I +RNR+ +NR G + Y+LM P ++ G+T +G+PNS+SI Sbjct: 690 LLVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAP-----SSEPGVTCRGVPNSVSI 926
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.583e-51 Identity = 98/242 (40.50%), Postives = 144/242 (59.50%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQS-SEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 +L +DYPY DGL +W AI TWV+ Y +Y + + +K+D E+Q+W+ E VGH D R+A WW E+++ D+L+ LT LIW +SA HA++NFGQY Y GY PNRP L R+ IPDE E+A + +KYY +P + A+V+ LS H+ DE Y+G+RQ S WT D ++I +RN + +NR G + Y+L+ P ++ G+T +G+PNS+SI Sbjct: 683 LLIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVP-----SSEPGVTCRGVPNSVSI 919
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.630e-48 Identity = 91/241 (37.76%), Postives = 137/241 (56.85%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 +L +DYPY DGL +W AI W + Y + +Y D++V++D E+Q+W+ E + GH DKR A WW +++ +L LT L+W SA HA++NFGQY GY PNRP L R+ +P EG E+A L+ D +++L LP T +++ LS H++DE YLG+R WT D ++I RN + +NR G + Y+LM P + G+T +G+PNS++I Sbjct: 664 LLIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAEGDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSG-----PGITCRGVPNSVTI 899
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.129e-48 Identity = 99/244 (40.57%), Postives = 144/244 (59.02%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHEFAEL---LIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 + +DYP+ DGL +W AI TWV+ Y + FY D DSV DEE+QA+W E+R GHGDK++A WW +++S ++L LT ++W ++A HA+VNFGQY + GY PNRP++ R +P E + A + L + D+ + P + T+ A+++VLS H++DE YLG Q+ W D I RN++ +LKNR G + Y+LM P +D G+TG GIPNS SI Sbjct: 703 LAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-----FSDAGVTGMGIPNSTSI 941
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.129e-48 Identity = 99/244 (40.57%), Postives = 144/244 (59.02%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHEFAEL---LIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 + +DYP+ DGL +W AI TWV+ Y + FY D DSV DEE+QA+W E+R GHGDK++A WW +++S ++L LT ++W ++A HA+VNFGQY + GY PNRP++ R +P E + A + L + D+ + P + T+ A+++VLS H++DE YLG Q+ W D I RN++ +LKNR G + Y+LM P +D G+TG GIPNS SI Sbjct: 686 LAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-----FSDSGVTGMGIPNSTSI 924
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48 Identity = 97/242 (40.08%), Postives = 136/242 (56.20%), Query Frame = 1 Query: 13 DYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIP-----DEGTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 DYP+ DGL +W AI WV DY +Y D++ + SDEE+Q WW E+R +GHGDK++ WW + ++D+LI +T + W +S HA+VNFGQY Y GY PNRPT R +P DE EF E +K LK P + TL +++LS H+ DE Y+G++Q + W ++ I ERN N LKNR G + Y+L+ P + + G+TG G+P SISI Sbjct: 663 DYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYE---SPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEH-----GVTGMGVPYSISI 896
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47 Identity = 94/243 (38.68%), Postives = 136/243 (55.97%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTH--EFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 + +DYPY DGL +W +I W DY +YK D V DEE++AWW+E+R GH DK++ WW ++++NL+Q LTI++W +S HA+VNFGQY YAGY PNRPT+ R+ IP E E + + ++ L+ LP + A +++LS H+ DE Y+G+ W + I RN N KNR G + Y+L+ P ++ G+TG+GIPNSISI Sbjct: 659 LAIKDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKP-----FSEPGVTGRGIPNSISI 896
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.945e-47 Identity = 97/243 (39.92%), Postives = 137/243 (56.38%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSE--WTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 ++ DYPY DGL +W AI V+ Y FY D S+ SD E+QAWW EI+ GH DK++ WW ++N+ +L Q LT +IW +S HA++NFGQY + GY PNRPTL RK IP E ++ + + +L LP + T A+ E LS H+ DE YL + + + W D+ + I ERN++ +LKNR G Y+L+ P + + G+TG+GIPNSISI Sbjct: 680 LVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPH-----GVTGRGIPNSISI 917
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.865e-44 Identity = 94/246 (38.21%), Postives = 136/246 (55.28%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPD--EGTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSS---EWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGKGIPNSISI 723 +L +DYPY DGL +W AI +WV+ Y ++Y D +V+ D E+Q W+ E VGHGD R+A WW +++ +L LT L+W +SA HA++NFGQY GY PNRP L R+ +PD E+A L D +++L +P T A+V+ LS H+ DE YLG+ + WT D+ + I RN + KNR G + Y+L+ P + G+T +G+PNSISI Sbjct: 678 LLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRHAPWWPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAP-----SSPPGVTCRGVPNSISI 918
BLAST of FC873628 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.427e-44 Identity = 92/248 (37.10%), Postives = 132/248 (53.23%), Query Frame = 1 Query: 1 ILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDE-GTHEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGLTGK------GIPNSISI 723 + +DYPY DGL VW AI W Y +Y + DEE+QAWW E+R GH DK++ WW E++S +NL Q L ++W +S HA+VNFGQY AGY PNRPT+ R+ +P E G + + + +K L P ++ + A++++LS H+SDE Y+G + WT D +++ E N + KNR G + Y L+ P + DG T + GIPNSISI Sbjct: 690 LAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDMRDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDGDPTDEKMVMEMGIPNSISI 936 The following BLAST results are available for this feature:
BLAST of FC873628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873628 ID=FC873628; Name=FC873628; organism=Citrus clementina; type=EST; length=789bpback to top |