FC873633

Overview
NameFC873633
Unique NameFC873633
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPY (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPS (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPP (Anthranilate phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPN (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPE (Anthranilate phosphoribosyltransferase OS=Yersinia pestis GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  122 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 281          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPB (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERPA (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 280          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_YERP3 (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 63/160 (39.38%), Postives = 101/160 (63.12%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D+  E  R  +D+ G+ F+ + +YH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++   P  + ++    IE +   P D+G+ R  L +LQGG P  N ++L R+L G+
Sbjct:  122 DLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYHTGFRHAMPVRQQLKTRTLFNVLGPLINPARPPLALIGVYSPELVLPIAQTLKVLGYQRAAVVHGGGMDEVAIHAPTQVAELNNGSIESYQLTPEDFGLNRYPLAALQGGMPEENRDILARLLQGK 281          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_PELPB (Anthranilate phosphoribosyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 78/207 (37.68%), Postives = 117/207 (56.52%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH---SEG--LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGER-GXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVLEALG  IDL PE  +    E+G  F+ +  YHP+MK V PVR++L ++T+FNILGP++NPA     +VGV+N  L+      L + G +RA++VH   +EG  LDE S  GP  I+++ +  +   +  P D+G+ R +L  +QGG    NA ++R++L G                   VS K   + +G+ +ARE   SGK+
Sbjct:  122 DVLEALGFTIDLPPEATKELFQESGFAFLFAPLYHPSMKRVAPVRRELGIRTIFNILGPLINPARAKRQLVGVFNRELMELYTEVLLQTGARRAMIVHAMTAEGIALDEPSLNGPTHIVEIHRGTVTEHTVYPEDFGLARHSLSEIQGGERDENARIIRQILDGSAPAAHRDAALFTTAMACYVSGKARCIDDGLDIAREALESGKS 328          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_VESOH (Anthranilate phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.482e-31
Identity = 73/215 (33.95%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEG 686
            DVL+A GV +++  E + +C+++ GIGFM +  +H ++K+   VRK L +KT+FNI+GP+ NPA VP  ++GVY +NLV  +A+ L++ G K  +VVHS +GLDE+S      + ++   KI+ ++ +P ++G+P   L+ ++      +  ++++ L G+                 V    N+L EGV+ A +I  SG A   LD ++  S G
Sbjct:  124 DVLKAAGVNLNMSVERISKCIEKIGIGFMFAPFHHHSIKYTTNVRKDLAIKTIFNIVGPLTNPAKVPNQIIGVYTQNLVEPIAHVLKKLGSKHIIVVHSKDGLDEISIADDTFVAELKNGKIKTYTINPTNFGLPLGNLDDIKVNNADDSLILIQQALDGKDSVAKNIVALNSGAAIYVCELANSLQEGVSKALKILNSGVAHQKLDDFVRESTG 338          
The following BLAST results are available for this feature:
BLAST of FC873633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_YERPY4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPS4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPP4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPN4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPE4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPB4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPA4.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERP34.198e-3139.38Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_PELPB4.198e-3137.68Anthranilate phosphoribosyltransferase OS=Pelodict... [more]
TRPD_VESOH5.482e-3133.95Anthranilate phosphoribosyltransferase OS=Vesicomy... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE06FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873633 ID=FC873633; Name=FC873633; organism=Citrus clementina; type=EST; length=809bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAGAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCTCGT
CGATCAACT
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