FC873633

Overview
NameFC873633
Unique NameFC873633
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_ALHEH (Anthranilate phosphoribosyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.351e-31
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 671
            DVLEA G  +DL+ + V  C+   G+GF+ + ++H AMK     R+++ V+T+FNILGP+ NPA  P  ++GVYN++ V+ +A  L+  G +R LVVH+ +GLDE+S     L+ ++ + +I  +   P  +G+PR  L  LQ G    +  ++R   +G  G                + K  TL  GVA A E+  +G AL  L+ ++
Sbjct:  123 DVLEAAGARLDLNADQVAECIRRVGVGFLFAPQHHSAMKHAIGPRREMGVRTLFNILGPLTNPAGAPHQLLGVYNKHWVVPVAETLRALGSRRVLVVHADDGLDEISIGSDTLVAELNEGEIHEYRITPEQFGLPRAELSDLQVGTAEESLALIREAFAGWEGPAFNIIAINAGAALYAAEKAPTLDAGVAGAAELLRNGSALRKLEAFV 332          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_XANCP (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=trpD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 80/219 (36.53%), Postives = 124/219 (56.62%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPG-LILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEGAPA 695
            D LEALG VI+L PE V   + + GIGFM +  +HPAMK V PVR+++ V+T+FNILGP+ NPA  P  ++GV++ +LV   A  LQ  G +RALVV   +G+DE+S LG G L+ ++   ++  +   P D+GI      +L+    A +  +L +VL    G               V+   +++A+G+  AR++   G A   LD ++  ++ A A
Sbjct:  126 DALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVWGRDGMDELS-LGAGTLVGELRDGQVHEYEVHPEDFGIAMSASRNLKVADAAESRAMLLQVLDNVPGPALDIVALNAGAALYVAGVADSIADGIVRARQVLADGSARACLDAYVAFTQQATA 343          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_XANC8 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 80/219 (36.53%), Postives = 124/219 (56.62%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPG-LILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEGAPA 695
            D LEALG VI+L PE V   + + GIGFM +  +HPAMK V PVR+++ V+T+FNILGP+ NPA  P  ++GV++ +LV   A  LQ  G +RALVV   +G+DE+S LG G L+ ++   ++  +   P D+GI      +L+    A +  +L +VL    G               V+   +++A+G+  AR++   G A   LD ++  ++ A A
Sbjct:  126 DALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVWGRDGMDELS-LGAGTLVGELRDGQVHEYEVHPEDFGIAMSASRNLKVADAAESRAMLLQVLDNVPGPALDIVALNAGAALYVAGVADSIADGIVRARQVLADGSARACLDAYVAFTQQATA 343          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_THIDA (Anthranilate phosphoribosyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 78/216 (36.11%), Postives = 119/216 (55.09%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEGA 689
            DVLEALGV + L PE V   +D  GIGFM +  +H AM+   PVR++L V+T+FNILGP+ NPA  P  ++GV++ +LV  +   LQR G    +VVH S+G+DE++  G  LI ++   ++  ++ +P ++G+  C  ++L+        ++L  VL    G               V+ +  TL EG+ LARE   SG A + L   +  S  A
Sbjct:  125 DVLEALGVNLALTPEQVAASIDAIGIGFMFAPNFHGAMRHAAPVRRELGVRTLFNILGPLTNPANAPHQLLGVFHADLVGILVRVLQRLGSSHVMVVHGSDGMDEITLAGDTLIGELKDGEVSEYTINPREFGLQPCGSDALKVWDATQAKDMLLSVLDDLPGPARDIVLFNAGAAIYVADRAATLGEGIELAREAIRSGAARDKLQQLVAYSTQA 340          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_RALEH (Anthranilate phosphoribosyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=trpD PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 74/214 (34.58%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSE 683
            DVLEALGV I L PE V +C++E GIGFM +  +HPAMK V P+RK++ V+T+FNILGP+ NPA  P  ++GV++ +LV      +QR G K A+VV+  +G+DE+S     L+ ++   ++  +   P D+G+   +   L+      + E+L   L+   G                +   +++ +G+  ARE   SG A   LD ++  ++
Sbjct:  125 DVLEALGVNIMLTPEQVGQCIEETGIGFMFAPTHHPAMKNVAPIRKEMGVRTIFNILGPLTNPADAPNILMGVFHPDLVGIQVRVMQRLGAKHAIVVYGKDGMDEVSLGAATLVGELKDGEVREYEIHPEDFGLQMISNRGLKVADATESKEMLLEALTNVPGTPREIVSLNAGTALYAANVADSVEDGIRRAREAIASGAAQEKLDQFVRATQ 338          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_LEPCP (Anthranilate phosphoribosyltransferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 77/214 (35.98%), Postives = 115/214 (53.74%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSE 683
            DVLEALG  I+L PE V   ++  GIGFM +  +H +MK   PVRK+L V+T+FNILGP+ NPA  P  V+GV++ +LV      LQR G    L+VH   G+DE+S  G  +I ++   +I  +   P D+G+P      L+      +   ++R L+ E G                +  V ++ +GV  ARE   SG+AL  L  ++ V++
Sbjct:  126 DVLEALGAHINLTPEQVAISLERCGIGFMFAPNHHASMKHAAPVRKELGVRTIFNILGPLTNPALAPNQVMGVFHPDLVGIQVRVLQRLGSSHVLIVHGMNGMDEISLSGETMIGELKAGQISEYVVHPADFGLPVYDTRVLKVANKEESVTCIQRALANEDGPVRDIVLLNAGAALYAADVVTSITDGVRAAREAVASGQALAKLSQYVAVTQ 339          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_AGRRK (Anthranilate phosphoribosyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 74/212 (34.91%), Postives = 109/212 (51.42%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D    LG+ +D+ PE + RC+ EAGIGFM +  +H +M+ V P R +L  +T+FN+LGP+ NPA     ++GV+    V+ +A  L+    +   VVH  GLDE++  G   +  +   KI  F   P D+G+    L  L+GG    NA  LR VLSGE+                ++ K  TL +G+ LA +   SG     L+  I VS
Sbjct:  123 DTQSVLGIKLDIGPEVIARCIREAGIGFMFAQLHHSSMRHVGPSRVELGTRTIFNLLGPLANPAGARRQLLGVFAPQWVVPLAEVLKDLNAESVWVVHGNGLDEITTTGTTSVAALEDGKIRTFELTPADFGLAHADLADLKGGDGIANAAALRAVLSGEKNAYRDISLANAAASLVIAGKAETLHDGMKLAAQSLDSGATAAALEKLIAVS 334          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_BRUSU (Anthranilate phosphoribosyltransferase OS=Brucella suis GN=trpD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.595e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVSPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_BACC4 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain B4264) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.595e-30
Identity = 76/213 (35.68%), Postives = 113/213 (53.05%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D+LE LGV I   P  +   ++  GI F+ +   HPA++ +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S DP  YG  R   E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S
Sbjct:  121 DLLEELGVNISSTPNEIDYLLEHVGIAFLFAPVMHPALRRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAEVLQKLGRKQALVVNGSGFLDEASLQGENHVVLLKDNEIVEMSIDPEKYGFSRVKNEEIRGGNSKENAKITLEVLSGEKSVYRDTVLLNAGLALFANGKTETIEEGIKLAAHSIDSGKALTKLNLLIAAS 333          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_SHESW (Anthranilate phosphoribosyltransferase OS=Shewanella sp. (strain W3-18-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.083e-30
Identity = 72/213 (33.80%), Postives = 110/213 (51.64%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKV-NTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D+L   G+ + + P+   RC+D   + F+ +  YH  +K   PVR+ LK +T+FN+LGP++NPA   F ++GVY+  LVL +A  L+  G KRA+VVH  GLDE++  G  L+ ++    I  +   P D G+P   +  L+GG PA NA +   +L G                    C + +++  G  LA     SGKA   L    +VS
Sbjct:  131 DLLAQFGIDLTMSPDTASRCLDALNLCFLFAPHYHGGVKHAGPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTLVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILRGRGTDAHANAVAINAGCALYVCGIADSVKAGTLLALSTIQSGKAFELLSQLAKVS 343          
The following BLAST results are available for this feature:
BLAST of FC873633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ALHEH9.351e-3134.76Anthranilate phosphoribosyltransferase OS=Alkalili... [more]
TRPD_XANCP1.221e-3036.53Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANC81.221e-3036.53Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_THIDA1.221e-3036.11Anthranilate phosphoribosyltransferase OS=Thiobaci... [more]
TRPD_RALEH1.221e-3034.58Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_LEPCP1.221e-3035.98Anthranilate phosphoribosyltransferase OS=Leptothr... [more]
TRPD_AGRRK1.221e-3034.91Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_BRUSU1.595e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BACC41.595e-3035.68Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_SHESW2.083e-3033.80Anthranilate phosphoribosyltransferase OS=Shewanel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE06FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873633 ID=FC873633; Name=FC873633; organism=Citrus clementina; type=EST; length=809bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAGAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCTCGT
CGATCAACT
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