FC873633

Overview
NameFC873633
Unique NameFC873633
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:524..1332. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD2_RALSO (Anthranilate phosphoribosyltransferase 2 OS=Ralstonia solanacearum GN=trpD2 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35
Identity = 85/214 (39.72%), Postives = 121/214 (56.54%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSE 683
            DVL ALGV +D  P  + RC+ EAGIGFM +  +HPA+K + PVR  L  +T+FN+LGP+LNPA V   ++GVY+   V  +A+AL   G +RALVVH S+GLDE++ +GP  +  + + ++  F   P   G+ R     L+G    +NA  LRRVL G+ G                +  V    + +ALAR     G AL TL+  +E S+
Sbjct:  123 DVLSALGVNLDQTPADIERCIAEAGIGFMFAPTHHPALKQLMPVRVDLATRTIFNLLGPLLNPAGVRHHLIGVYSRAWVEPLAHALGDLGSERALVVHGSDGLDEITTVGPTFVSMLARGRVRSFEITPEMVGLVRANPAELKGADGKWNAVALRRVLEGQPGAYRDIALFNAAGGLIAAGVVENWPDAMALARASVDGGAALATLNRLVEASQ 336          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_PHEZH (Anthranilate phosphoribosyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=trpD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.173e-35
Identity = 83/212 (39.15%), Postives = 118/212 (55.66%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVL  LGV I   PE   + +DEAGI F+ +  +H AM+ V P+R +L  +T+FN+LGP+ NPA     VVGV+ E  V  +A AL   G ++A VVH  GLDE++  G   + + +  K+  F+  P   G+ R  L  + GG PA NA+ LRR+L+GE G               V+ KV TL EGV LA  +   G+A   L+  +E++
Sbjct:  124 DVLGELGVNIAAPPEKQLQALDEAGICFLFAPAHHSAMRHVSPIRAELGFRTIFNLLGPLTNPAGAQRQVVGVFAERWVKPLAQALGMLGSEKAWVVHGAGLDELTTTGETSVAEFSDGKVRLFTITPEAVGLRRAALADITGGSPAENAQALRRLLAGETGAYRDIVALNAAAAFLVADKVETLREGVELAGRVLDEGRAQAALERLVEIT 335          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34
Identity = 79/202 (39.11%), Postives = 117/202 (57.92%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 650
            DVLEALG+ +DL PE VR+ +++ GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     VVGV+++NL   +A AL   G + ALVVH +G+DE++  G   + ++   K+  ++  P   G+ R +    +GG P  NA  L  +  G++G               VS  V ++ + + +A +   SGK +
Sbjct:  124 DVLEALGIKVDLSPEYVRKTIEKIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGAKGQVVGVFDKNLCEPIAYALAELGTEHALVVHGDGMDEITNTGETYVAELKNGKVSTYTLTPESLGMLRASPGDTKGGSPKENARDLLCIFKGQKGPKRDLIILNAAAALYVSGIVGSIRQAIPIAEDAIDSGKVM 325          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_THETN (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis GN=trpD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVL  LG  I+ +P   ++ ++E G+GF+ +  YH AMK V P+R++L  +TVFN+LGP+ NPA +   V+GVY+ NL   +A  L + G++RA+VVH  +GLDE++   P  + +V + +I  +  DPLD+ IP    E L+G GP  NAE++  +L G++G               V   V  L EGV LA  +  SG A
Sbjct:  122 DVLRELGFNIEAEPMYTKKMIEEKGMGFLFAPLYHRAMKNVLPIRRELGTRTVFNLLGPLTNPAPIKGQVLGVYDRNLTHPIAEVLLKLGIERAMVVHGFDGLDEITTTAPTYVSEVKEGEIFDYVIDPLDFDIPYSKPEDLKGKGPRENAEIIIDILKGQKGPRRDIVVLNTAAALYVGKLVENLKEGVELAERLLNSGLA 323          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_COLP3 (Anthranilate phosphoribosyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=trpD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34
Identity = 76/213 (35.68%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D+LEA GV + + PE    C+ +  + F+ +  YH   K+  PVRK + ++T+FNILGP++NPA     ++GVY   L++ MA ALQ  G+KRA VVH  GLDE++  G    +++   ++   +  P D+G+   TLE ++GG PA NA+++R +LSG+ +                +  K  +L +   LA E+  SGK L+TL   +++S
Sbjct:  138 DLLEAFGVNLSMSPETANHCLAQTNLCFLYAPAYHSGFKYAGPVRKAMGIRTLFNILGPLVNPAKPNIMLLGVYTPELLMPMAQALQLTGVKRAFVVHGSGLDEIALHGNTQAIEINNGELIERTISPQDFGLKNYTLEEIKGGTPAENADIIRDILSGQGKDAHNAAVIVNCAALLYLHDKAESLTQAAQLATEVLASGKGLSTLLTLVKLS 350          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_SINMW (Anthranilate phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=trpD PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.821e-34
Identity = 81/215 (37.67%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEGA 689
            D L  LGV +++ PE + RC+ EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGVY    V  +A  L+  G +   VVH EGLDE++  G   +  +    I  F   P D+G+ R TL++L+GG  A+NA  L+ VL G                  ++ +   L EG+ LAR+   SG A   L   I VS  A
Sbjct:  123 DALSCLGVNLEIGPEAISRCIGEAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLANPAGVRQQLVGVYAPQWVDPLAEVLRDLGSESVWVVHGEGLDEITTTGVTKVAALKDGTITNFELTPADFGLERVTLDALKGGDGAHNAAALQAVLDGAENAYRDISLANAAASLMIAGRAKDLMEGMDLARKSLSSGAAKVALQRLITVSNAA 337          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.821e-34
Identity = 89/215 (41.40%), Postives = 119/215 (55.35%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEG 686
            DVL +LGV IDL PE V RCV E GIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +   +I  F   P + G+PRC   +L+GG    NA  L+ VL+G+                 V+ +   L EGVAL  +   SG A   L   I VS G
Sbjct:  123 DVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMVGVFSRQWVQPLAQVLKNLGSESAWVVHGSDGLDEITLTGPTFVSSLHNGEIRNFEVTPEEAGLPRCEPGALKGGDADANAIALQSVLNGKPSAYRDVALMNAAAALVVAGRAKDLKEGVALGAKSLDSGAANARLKHLIAVSNG 337          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_DESHY (Anthranilate phosphoribosyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=trpD PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.378e-34
Identity = 81/207 (39.13%), Postives = 122/207 (58.94%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALV-VHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLE LG+ +   PE   R +   G+ F+ +  YHPAM  V   R++L ++T+FN+LGP+LNPA  P+ ++GV + +L+ KMA ALQ  G KRA+V V  +GLDE++  G    + +   +I+ F   P +YG+  C+L+ LQGG PA N ++  R+L G++G                + K   + EG+ALA E   SGKAL+ L+
Sbjct:  124 DVLEQLGISLKATPESSERHLQHIGMTFLFAQVYHPAMAKVAAERRELGIRTIFNLLGPLLNPAGAPYQLLGVSSPSLLPKMAKALQILGSKRAVVAVGEDGLDEVTLTGATQAILIDGGEIQPFIIRPEEYGLNLCSLQDLQGGTPAENGQITLRILQGKKGPQRDIVLLNAGTALYAANKAAGIREGIALAAESLDSGKALSILE 330          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.106e-34
Identity = 88/213 (41.31%), Postives = 117/213 (54.93%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVL ALGV ID+ PE V RCV EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  L+  G +   VVH S+GLDE++  GP  + ++   +I  F   P + G+PR   E+L+GG    NA  LR VL G                  V+ K   L EGVAL  +   SG A   L   I V+
Sbjct:  123 DVLNALGVRIDITPEHVGRCVTEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGSESIWVVHGSDGLDEITLSGPTAVAELKNGEIRTFEVTPDEAGLPRAHAEALRGGDAEANAVALRSVLEGMPSPYRDVALLNAAAALVVAGKAKDLKEGVALGAKSIDSGAAEGRLRRLIAVT 335          
BLAST of FC873633 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.106e-34
Identity = 81/215 (37.67%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSEGA 689
            D L  LGV +D+ P  + RC+ EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGVY    V  +A  L+  G +   VVH EGLDE++  G   +  +    I  F   P D+G+ R +L++L+GG  A+NA  L+ VL G                  ++ +   L+EG+ALAR+   SG A   L   I VS  A
Sbjct:  123 DALSCLGVNLDIGPAVISRCIAEAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLANPAGVRQQLVGVYAPQWVDPLAEVLRDLGSESVWVVHGEGLDEITTTGVTKVAALKDGTITNFELTPADFGLERVSLDALKGGDGAHNAAALQAVLDGAENAYRDISLANAAASLMIAGRAGDLSEGMALARQSLSSGGAKVALQRLITVSNAA 337          
The following BLAST results are available for this feature:
BLAST of FC873633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD2_RALSO4.791e-3539.72Anthranilate phosphoribosyltransferase 2 OS=Ralsto... [more]
TRPD_PHEZH8.173e-3539.15Anthranilate phosphoribosyltransferase OS=Phenylob... [more]
TRPD_METMA1.067e-3439.11Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_THETN1.394e-3439.11Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_COLP31.394e-3435.68Anthranilate phosphoribosyltransferase OS=Colwelli... [more]
TRPD_SINMW1.821e-3437.67Anthranilate phosphoribosyltransferase OS=Sinorhiz... [more]
TRPD_BRAJA1.821e-3441.40Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_DESHY2.378e-3439.13Anthranilate phosphoribosyltransferase OS=Desulfit... [more]
TRPD_RHOPS3.106e-3441.31Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHIME3.106e-3437.67Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE06FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873633 ID=FC873633; Name=FC873633; organism=Citrus clementina; type=EST; length=809bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAGAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCTCGT
CGATCAACT
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