FC873634

Overview
NameFC873634
Unique NameFC873634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_SHIBS (Adenylate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_SHIB3 (Adenylate kinase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_RICAH (Adenylate kinase OS=Rickettsia akari (strain Hartford) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 40/164 (24.39%), Postives = 80/164 (48.78%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            IK+ +    +I N +K+G++VP+ +  ++++  +  S   + +++DG+PRN E    FE+  K E   +++FD S+E + +R+L R                                 R+DDN E ++KR +V+   + P++ YY+  G    ++ +K   E+
Sbjct:   39 IKTSTSEAELINNYVKQGELVPNAIVNQVIKNFLLSSAYKNGYILDGYPRNLEQAKFFESFIK-EKIKIIYFDVSDELLIKRVLGRYSCKNCRKIYNSYFLQPKTDNVCDVCGSSTFDYRKDDNEEVVKKRIEVYKTETYPLIDYYKNSGNFYLVNGSKNEQEI 201          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_LEUMM (Adenylate kinase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 41/144 (28.47%), Postives = 72/144 (50.00%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            +   +E G   +  +  G +VP E+T  ++   + +   +  F++DG+PRNE      +       + V   L+F+ ++  +  R+L R  GR DD  E I  R  V   ++LP+V YY+  G +  ID  + +A+V+  VK V
Sbjct:   41 LAENTELGQKARQFMDAGDLVPDEITNAMVADRLNQQDVETGFMLDGYPRNEAQAVFLDKYLSDNGKSVSATLYFEVADTLLRERLLGR--GRADDTPEVIDNRLAVNKAANLPLVDYYQKAGVLHTIDGGRELADVYHDVKEV 182          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_HELPG (Adenylate kinase OS=Helicobacter pylori (strain G27) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 37/138 (26.81%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   17 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVL----FFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            +E G +I+    +G++VP E+ ++ +  A++ S     LIDG+PR+ E   A +     + E VL        SE   + R+L R++G  DDN      R +VFL+    +  +Y+ K   + I+  + + E+ + ++
Sbjct:   47 TERGLLIEKFTSQGELVPLEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALDKELNAQNEVVLKSVIEVKVSENTAKERVLGRSRG-ADDNERVFHNRMRVFLDPLAEIQNFYKNKNVYKAINGERSIEEIVNEMQ 183          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_ESCF3 (Adenylate kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_ECOSM (Adenylate kinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_ECOSE (Adenylate kinase OS=Escherichia coli (strain SE11) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_ECOLU (Adenylate kinase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_ECOLI (Adenylate kinase OS=Escherichia coli (strain K12) GN=adk PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
The following BLAST results are available for this feature:
BLAST of FC873634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
KAD_SHIBS3.478e-1129.76Adenylate kinase OS=Shigella boydii serotype 4 (st... [more]
KAD_SHIB33.478e-1129.76Adenylate kinase OS=Shigella boydii serotype 18 (s... [more]
KAD_RICAH3.478e-1124.39Adenylate kinase OS=Rickettsia akari (strain Hartf... [more]
KAD_LEUMM3.478e-1128.47Adenylate kinase OS=Leuconostoc mesenteroides subs... [more]
KAD_HELPG3.478e-1126.81Adenylate kinase OS=Helicobacter pylori (strain G2... [more]
KAD_ESCF33.478e-1129.76Adenylate kinase OS=Escherichia fergusonii (strain... [more]
KAD_ECOSM3.478e-1129.76Adenylate kinase OS=Escherichia coli (strain SMS-3... [more]
KAD_ECOSE3.478e-1129.76Adenylate kinase OS=Escherichia coli (strain SE11)... [more]
KAD_ECOLU3.478e-1129.76Adenylate kinase OS=Escherichia coli O17:K52:H18 (... [more]
KAD_ECOLI3.478e-1129.76Adenylate kinase OS=Escherichia coli (strain K12) ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873634 ID=FC873634; Name=FC873634; organism=Citrus clementina; type=EST; length=782bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTTTAAAAAAAAAAAAAAAAAAAA
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