FC873634

Overview
NameFC873634
Unique NameFC873634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_XANOM (Adenylate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=adk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.574e-14
Identity = 46/145 (31.72%), Postives = 87/145 (60.00%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAV-TKI-EP-EFVLFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            E+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN     A  A+ +KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + ++
Sbjct:   38 EVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLERIR 182          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_XANC5 (Adenylate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=adk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.574e-14
Identity = 46/144 (31.94%), Postives = 86/144 (59.72%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            E+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A  E + KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:   38 EVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_XANAC (Adenylate kinase OS=Xanthomonas axonopodis pv. citri GN=adk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.574e-14
Identity = 46/144 (31.94%), Postives = 86/144 (59.72%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            E+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A  E + KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:   38 EVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_CAMC1 (Adenylate kinase OS=Campylobacter concisus (strain 13826) GN=adk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.574e-14
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            E+ SGSE G +I   I +G +VP +V +  +  A++ S     +IDG+PR+ E     + V   + E     V+  D SE+    R+L R +G  DDN E    R KV+L+   P+ ++Y  K  +  ++  + + E+   +K
Sbjct:   41 EVASGSELGKLIDGFISKGNLVPLDVVVNAIVSAIKSSNKSNIIIDGYPRSVEQMTELDKVLSEQDEISLKGVIEVDVSEDVARARVLGRARG-ADDNNEVFNNRMKVYLDPIKPIRKFYSEKELLHVVNGERGIDEIVADIK 182          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_XANCB (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=adk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 45/144 (31.25%), Postives = 86/144 (59.72%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAV-TKI-EP-EFVLFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            E+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A +++ +KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV   +
Sbjct:   38 EVAAGSPLGVKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLKRI 181          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_THEAB (Adenylate kinase OS=Thermosipho africanus (strain TCF52B) GN=adk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 47/170 (27.65%), Postives = 87/170 (51.18%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            + S SE G  ++ ++K G +VP ++T  +++  + +E   + F++DGFPR      A + + +    + ++V++F+  EEE+ +RI NR    N G                         REDD  E +RKR++V++E++ PV++YY+   K+  ++ A  V  V   V
Sbjct:   39 VASKSELGKKVEEILKRGDLVPDDLTNSIVKDRLSKEDCKNGFILDGFPRTVAQAKALDEIMRSLGKDLDYVIYFEVDEEEVVKRISNRRICSNCGKIYNLITLPPKVDGKCDVCGGTLYQREDDKEEVVRKRYRVYMENTYPVIEYYQKSNKLFTVNGALDVDSVIKEV 208          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_LEPBP (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=adk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 43/143 (30.07%), Postives = 80/143 (55.94%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            +K+G+  G   +  +  G +VP  V I +++  + E+   + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R   +GR DDN ETI+ R   +   +LP++ +Y+A G +R+I+    + E+ + +
Sbjct:   40 VKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEETIKNRLHTYNTKTLPLIDFYKATGILRQINGLGSMEEITNTI 182          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_LEPBA (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=adk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 43/143 (30.07%), Postives = 80/143 (55.94%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            +K+G+  G   +  +  G +VP  V I +++  + E+   + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R   +GR DDN ETI+ R   +   +LP++ +Y+A G +R+I+    + E+ + +
Sbjct:   40 VKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEETIKNRLHTYNTKTLPLIDFYKATGILRQINGLGSMEEITNTI 182          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_AQUAE (Adenylate kinase OS=Aquifex aeolicus GN=adk PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQG----------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            ++ G+  G   +  ++ G++VP ++ I L+++   + GN   + DGFPR  +   A + + +   ++ + VL F+  +E +  R+  R                         REDD  E I+KR +V+ E + P+++YY+ KG +R IDA+KPV EV+  V  V
Sbjct:   39 VQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGN--VIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEV 201          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_THEM4 (Adenylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 47/171 (27.49%), Postives = 88/171 (51.46%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            EI + SE G  +++++K G++VP ++T  ++++ + +    K F++DG+PR      A + + K    E +F ++F+ SE+ + +RI NR    N G                         REDD  E +R+R+KV+++++ PV++YY    K+  +D +  V  V   V
Sbjct:   38 EISAKSELGRKVEDILKRGELVPDDLTNVIVKERLSKPDCKKGFILDGYPRTVAQAKALDEILKKLGRELKFAIYFEVSEDVVVKRISNRRICKNCGKIYNLITLPPKINGKCDVCGGELYQREDDREEVVRRRYKVYMDNTYPVIEYYRKSNKLFTVDGSMDVDSVIKEV 208          
The following BLAST results are available for this feature:
BLAST of FC873634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
KAD_XANOM2.574e-1431.72Adenylate kinase OS=Xanthomonas oryzae pv. oryzae ... [more]
KAD_XANC52.574e-1431.94Adenylate kinase OS=Xanthomonas campestris pv. ves... [more]
KAD_XANAC2.574e-1431.94Adenylate kinase OS=Xanthomonas axonopodis pv. cit... [more]
KAD_CAMC12.574e-1430.07Adenylate kinase OS=Campylobacter concisus (strain... [more]
KAD_XANCB3.361e-1431.25Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_THEAB3.361e-1427.65Adenylate kinase OS=Thermosipho africanus (strain ... [more]
KAD_LEPBP4.390e-1430.07Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]
KAD_LEPBA4.390e-1430.07Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]
KAD_AQUAE5.734e-1428.48Adenylate kinase OS=Aquifex aeolicus GN=adk PE=1 S... [more]
KAD_THEM47.488e-1427.49Adenylate kinase OS=Thermosipho melanesiensis (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873634 ID=FC873634; Name=FC873634; organism=Citrus clementina; type=EST; length=782bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTTTAAAAAAAAAAAAAAAAAAAA
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