FC873634

Overview
NameFC873634
Unique NameFC873634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1131 contig Ccv1_Contig1131:1..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_CAMFF (Adenylate kinase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV----TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            E+ SGSE G +I + I +G +VP EV +  +  A+  S  +  LIDG+PR+EE     + V    ++++ + V+  D SEE    R+L R +G  DDN E    R KV+L+    +  +Y  K  +  I+  + +  +   +K
Sbjct:   41 EVASGSELGKLIDSFISKGNLVPLEVVVNTIISAIRSSDKNYILIDGYPRSEEQMRELDRVLASQSEVKLDGVIEVDVSEEVARNRVLGRARG-ADDNNEVFNNRMKVYLDPIKEIRAFYNDKKILHMINGERTIETIVADMK 182          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_BACV8 (Adenylate kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=adk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKI------EPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAV 424
            EIK G+E G   +  I +G+++P E+ I +L   ++     K +I DGFPR     A  EA+ K+      E   +L  D  EEE+  R++ R Q  GR DDN ETI+KR  V+   + P++ +Y+ +GK + I     +  +F D V AV
Sbjct:   39 EIKKGTELGKTAKGYIDQGQLLPDELIIDILASTLDSFKESKGVIFDGFPRTI---AQAEALKKMLAERGQEVSVMLDLDVPEEELMTRLIKRGQESGRADDNEETIKKRLVVYHSQTAPLIDWYKNEGKYQHIHGLGTMDAIFADIVAAV 186          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_THEEB (Adenylate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=adk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 47/150 (31.33%), Postives = 79/150 (52.67%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR------NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 421
            E  +G+  G   Q+ +  G++VP +V + ++   +++      +L+DGFPRN    A FE + K    + +++LF D     ++ R LNR       Q R DD  ETI KR +V+   +LP++Q Y +  K   ID  + + EV  A++A
Sbjct:   38 ERAAGTLLGQQAQSYMDRGELVPDQVIVDMVANRLQQPDTAAGWLLDGFPRNGAQAAVFEEMLKSIHQDYDYLLFLDVPAAILQERALNRAKQAVNGQQRSDDTPETILKRLQVYERETLPMIQQYMSHPKFVPIDGTRTIEEVTAAIQA 187          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_PROAC (Adenylate kinase OS=Propionibacterium acnes GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 46/151 (30.46%), Postives = 81/151 (53.64%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKD 439
            IK+G+E G  ++ ++  G +VP E+T  ++  +  ++   + FL+DG+PRN     A +A  K   +    V+  D   E + +R+L R +  GR DDN ETIR R KV+   + P++++Y + G +  +D    + EV   + A    K+
Sbjct:   39 IKNGTELGKKVKAIMDAGDLVPDELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELLTQRLLKRAEIEGRTDDNEETIRNRMKVYSSQTEPLLEHYRSAGILVPVDGVGEIDEVRQRIFAALDSKN 189          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_PARL1 (Adenylate kinase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 46/149 (30.87%), Postives = 80/149 (53.69%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCSE--EEMERRILNRNQG-REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            +  GSE G + + ++  G++VP +V + ++   +E+    + +++DGFPRN     A + +     T ++    L  D S   + +E R      G R DDN E + KR KV+ E + P++ YY+AKGK+R +D  K + EV   ++ V
Sbjct:   39 VAQGSEVGKVAEGIMARGELVPDDVVVGIIADRIEQPDAVNGYILDGFPRNVAQAEALDKMLAGKGTTLDAVVELGVDDSILLKRIETRAAETAGGPRADDNAEALAKRLKVYHEQTAPLIAYYKAKGKLRTVDGMKSMDEVTGQIETV 187          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_NATTJ (Adenylate kinase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 49/172 (28.49%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEP-EFVLFFDCSEEEMERRILNR-------------------------NQG----REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAV 424
            +  G+E G   ++ +  G++VP +V I ++++ +++   ++ F++DGFPR      A + V    P    ++ D S++E+  R+  R                         ++G    R+DDN ET ++R +V+LE++ P+V+YY+ +G ++KID  K   EVF D +KAV
Sbjct:   39 VSEGTELGKEAKSYMDAGQLVPDDVVIGIVEERLKKPDCHEGFILDGFPRTVTQAEALDKVLSDNPLTAAVYIDVSKDELIDRLSGRRICRKCGKSYHIKFNPPQVRGVCDEDEGELYQRDDDNEETAKERLEVYLENTQPLVEYYQDRGILKKIDGTKSPEEVFRDILKAV 210          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_SYNR3 (Adenylate kinase OS=Synechococcus sp. (strain RCC307) GN=adk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 42/143 (29.37%), Postives = 84/143 (58.74%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKI--EP-EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 421
            E+K+GSE G   + ++  G++V   + + +++  ++ S +  +L+DGFPRN     A +A+     +P + VL  +  ++E+ +R+L R  GR DDN E IR R  V+ E + P++ +YE +G+++++ +   +  V + + A
Sbjct:   40 EVKAGSELGKEAEAVMNRGELVSDALVLAIVRSRLQ-SHSGGWLLDGFPRNLAQAEALDALLSELNQPLQSVLLMELDDDELVQRLLAR--GRADDNEEVIRHRLSVYREQTAPLINHYEQRGQLKRVVSTGTIEAVAEQITA 179          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_EUBR3 (Adenylate kinase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=adk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 48/173 (27.75%), Postives = 89/173 (51.45%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKL-LQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKI--EPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            IK+G+E G   +  + +G +VP E+T  L + +  ++   + F++DGFPR   + +A  +A+TKI  + ++ +  D  +E +  R+  R    N G                         R+DD  ET++KR  V+ E + P+++YY+ +G ++ +D  KP+ EVF A+  +
Sbjct:   39 IKNGTELGKKAKTYMDQGALVPDELTCDLVMDRIQQDDCKNGFVLDGFPRTIPQAKALDDALTKIGEKMDYAIDVDVPDENIVNRMGGRRACLNCGATYHIVFNPTKVEGKCDACGADTVLRDDDKPETVQKRLAVYHEQTQPLIEYYDKQGILKSVDGTKPMDEVFSAIVGI 211          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_STRAW (Adenylate kinase OS=Streptomyces avermitilis GN=adk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.716e-13
Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRN------------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV----FDAVK 418
            I   +E G + ++ + EG +VP EVTI + +  ME+    + FL+DGFPRN +   A + + K E    + VL  +  E+E+ +RI  R                                 R+DD+ ET+R+R +V+   + P++ YY A+G V  I A  PV EV     DA+K
Sbjct:   39 ISQQTELGKLAKSYMDEGNLVPDEVTIAMAKDRMEQPDAVNGFLLDGFPRNVKQAEALDEMLKSEGMKLDAVLDLEVPEDEVVKRIAGRRICRNDSAHVFHVSYKPPKQEGVCDVCGGELYQRDDDSEETVRRRLEVYHTQTEPIIDYYRAQGLVVTISALGPVEEVTQRAMDALK 214          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_MYCA9 (Adenylate kinase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=adk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.716e-13
Identity = 48/138 (34.78%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 406
            I  G+E G   +  +  G +VPSEVT K+++  ++E      F++DGFPR  +     AA E    +  + VL F    EE+ +R+L R  GR DD  + IR R  V+ + + P+++YY+    ++ IDA   V EVF
Sbjct:   39 ISEGTELGLQAKQYLDAGDLVPSEVTNKMVEARLDEPDAAAGFILDGFPRTVDQADALAAMEEARGVTIDAVLEFRVPVEELVQRLLGR--GRADDTEDIIRNRLNVYRDETAPLLEYYQ--NVLQTIDAVGTVDEVF 172          
The following BLAST results are available for this feature:
BLAST of FC873634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
KAD_CAMFF7.488e-1431.47Adenylate kinase OS=Campylobacter fetus subsp. fet... [more]
KAD_BACV87.488e-1435.10Adenylate kinase OS=Bacteroides vulgatus (strain A... [more]
KAD_THEEB9.780e-1431.33Adenylate kinase OS=Thermosynechococcus elongatus ... [more]
KAD_PROAC1.668e-1330.46Adenylate kinase OS=Propionibacterium acnes GN=adk... [more]
KAD_PARL11.668e-1330.87Adenylate kinase OS=Parvibaculum lavamentivorans (... [more]
KAD_NATTJ1.668e-1328.49Adenylate kinase OS=Natranaerobius thermophilus (s... [more]
KAD_SYNR32.179e-1329.37Adenylate kinase OS=Synechococcus sp. (strain RCC3... [more]
KAD_EUBR32.846e-1327.75Adenylate kinase OS=Eubacterium rectale (strain AT... [more]
KAD_STRAW3.716e-1330.68Adenylate kinase OS=Streptomyces avermitilis GN=ad... [more]
KAD_MYCA93.716e-1334.78Adenylate kinase OS=Mycobacterium abscessus (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873634 ID=FC873634; Name=FC873634; organism=Citrus clementina; type=EST; length=782bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTTTAAAAAAAAAAAAAAAAAAAA
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