FC873634

Overview
NameFC873634
Unique NameFC873634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1131 contig Ccv1_Contig1131:1..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_BRAHW (Adenylate kinase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=adk PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.716e-13
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            I +G+E G   ++ + +G++VP  + I +L+  +++    + F++DGFPR  E       + +    +   V+    SEE +  R+L R  GR DDN ETI+ R KVF   S PV+ YY  K K+ KI++     EV+  +K
Sbjct:   40 IANGTELGKTAKSYMDKGELVPDSLVIDMLKDRIKKDDCKNGFMLDGFPRTIEQAKELSNILESLNYKISAVIDIFASEEIIIDRLLKR--GRADDNEETIKNRLKVFENQSKPVLDYYSDKAKIIKIESIGTPEEVYAKIK 179          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_SULNB (Adenylate kinase OS=Sulfurovum sp. (strain NBC37-1) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.854e-13
Identity = 46/149 (30.87%), Postives = 76/149 (51.01%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNR------NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            E+ SGSE G  I++ I +G +VP  + I  +  A++ +  D  LIDG+PR+EE   AF+ +   E +     V+    SEE    RIL R       + R DD+ E    R K++ +    + ++Y  KG +  I+  + + EV D ++
Sbjct:   42 EVASGSELGKTIESYIAKGALVPLNIIIDTIVSAIKHAPVDTILIDGYPRSEEQMTAFDELVSKEDDIDLVSVIEVRVSEEVARERILGRRAEAAPGEERSDDSEEVFNDRMKIYTDPLGAIQRFYTDKGLLTIINGERTLDEVVDEME 190          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_CAMHC (Adenylate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.854e-13
Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 436
            E+   SE G  I  +I  G +VP E+ I  +  A+     D  +IDG+PR+ E     + V   E +     V+  + SEE  + R+L R +G  DDN E    R KVF+E    + ++Y  KG    I+  + + E+   + A+   K
Sbjct:   41 EVAKDSELGKKIDKIISGGNLVPLEIVINTITSAIHACEKDFIIIDGYPRSVEQMTELDKVLANEYDINLSAVIEVNVSEEVAKERVLGRARG-ADDNEEVFYNRMKVFVEPIEEIRKFYNEKGIFHSINGERTIEEIVTDINAIIVKK 188          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_SYNJA (Adenylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13
Identity = 44/147 (29.93%), Postives = 84/147 (57.14%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNRN--QGREDDNVET-IRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            E+K+ +  G   +  +  G++VP EV I +++  ++ S    +++DGFPR      A E + +    + + VL  +  ++ +  R+L R   QGR DD  E  I KR +V+ E + P++ +YEA+G++R+ID  +P+  V + ++A+
Sbjct:   39 EVKAQTPLGCQAKVYMDAGELVPDEVLIGMVKGQLQHSPAQGWILDGFPRTLAQAEALEELLRELGQDYDHVLNLEVPDDVVVARLLARGKEQGRSDDADEAVILKRLQVYREQTAPLIDFYEARGRLRRIDGNQPMESVQEHLRAL 185          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_PARD8 (Adenylate kinase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13
Identity = 44/145 (30.34%), Postives = 77/145 (53.10%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            E+K+ +E G + ++ I++G++VP E+ + +L   ++     K +I DGFPR      A + +      +   +L     EEE+ +R+L R +  GR DDN+ETI+ R  V+   + P+  YY  +GK   I     + E+F  +K
Sbjct:   39 EMKAETELGKIAKDYIEKGQLVPDELIVDMLANVLDSKKPAKGVIFDGFPRTIPQAKALKKMLNERGTDVSVMLNLQVEEEELIKRLLERGKVSGRSDDNLETIKSRLDVYHTQTAPLADYYVGEGKHVAIKGMGTIEEIFGRIK 183          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_CAMLR (Adenylate kinase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKI 376
            E+ SGSE G  I + I +G +VP EV +  +  A++ +  +  LIDG+PR+ E    F+ V K + E     V+    SEE    R+L R +G  DDN E    R KV+LE    +  +Y AK  +  I
Sbjct:   41 EVASGSELGKTIDSFISKGNLVPLEVVVNTIITALKNAPTNTILIDGYPRSVEQMLEFDKVLKNQSEVNLKGVIEVKVSEEVARERVLGRARG-ADDNEEVFNNRMKVYLEPLNEITNFY-AKENIHHI 167          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD2_CAEBR (Adenylate kinase 2, mitochondrial OS=Caenorhabditis briggsae GN=let-754 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNR----NQGRE-------------------------DDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV---FDAVKAVFTPK 436
            E+ SGSE G  ++  +  GK+V  +V  KL+++ +E+      F++DGFPR        + +    K   + V+ F+ +++ + RRI  R      GR                          DDN ET+RKR   + + ++P+V YY+  G   K+DAAKP+A+V    D+V A FT K
Sbjct:   75 EVASGSEFGKQLKATMDAGKLVSDDVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEETLRKRLVQYHQMTVPLVDYYQKHGVHVKVDAAKPMADVKAHIDSVFAKFTQK 255          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_PETMO (Adenylate kinase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=adk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            +  G+E G M + ++  G++V  E+   L+++ +EE   D F++DG+PR  +     +  TK    E +  +  D SEEE+ +RI NR    N G                         R+DD  E +R+R+KV+ +++ PV++YY    K+  ID A+ V +V
Sbjct:   39 VSKGTELGKMAKAIMDRGELVSDEIMNSLVKERLEEL--DSFILDGYPRTLDQAKFLDQATKELQKEIDAAVLIDVSEEEIVKRISNRRVCPNCGKVYNLITLQPKEDEKCDVCGTKLIQRDDDKEEVVRERYKVYKKNTEPVIEYYRKNNKIITIDGAQNVEDV 201          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_SYNJB (Adenylate kinase OS=Synechococcus sp. GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 41/147 (27.89%), Postives = 86/147 (58.50%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNRN--QGREDD-NVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            E+K+ +  G   +  +  G++VP EV I +++  +++S    +++DGFPR      A E + +    + ++VL  +  +E +  R+L R   QGR DD +   I KR +V+ + + P++ +YEAKG++++++  +P+  V + ++A+
Sbjct:   39 EVKAQTPLGCQAKVYMDAGELVPDEVLIGMVKGQLQQSPEQGWILDGFPRTLAQAEALEELLQELGQDYDYVLNLEVPDEVVVARLLARGKEQGRSDDADRSVILKRLEVYRQQTAPLIDFYEAKGRLQRVNGNQPMESVQEHLQAL 185          
BLAST of FC873634 vs. ExPASy Swiss-Prot
Match: KAD_STRMU (Adenylate kinase OS=Streptococcus mutans GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = 2
Query:   17 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFD----CSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 424
            +E GT+ ++ I +G++VP EVT  ++++ + ES   K  FL+DG+PR  E   A + +     ++ + V+  D    C  E +  RI+NR  G                    REDD  ET+++R  V +    P+++YY  KG V  I+  + +  VF+ +  V
Sbjct:   43 TEMGTLAKSFIDKGELVPDEVTNGIVKERLSESDITKKGFLLDGYPRTIEQAHALDEILSKLNLKLDGVINIDVDPACLVERLSGRIINRKTGETYHKVFNPPADYNEDDYYQREDDKPETVKRRLDVNIAQGHPIIEYYRNKGLVYDIEGNQDINLVFETIAKV 207          
The following BLAST results are available for this feature:
BLAST of FC873634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
KAD_BRAHW3.716e-1333.10Adenylate kinase OS=Brachyspira hyodysenteriae (st... [more]
KAD_SULNB4.854e-1330.87Adenylate kinase OS=Sulfurovum sp. (strain NBC37-1... [more]
KAD_CAMHC4.854e-1330.20Adenylate kinase OS=Campylobacter hominis (strain ... [more]
KAD_SYNJA6.339e-1329.93Adenylate kinase OS=Synechococcus sp. (strain JA-3... [more]
KAD_PARD86.339e-1330.34Adenylate kinase OS=Parabacteroides distasonis (st... [more]
KAD_CAMLR8.279e-1335.66Adenylate kinase OS=Campylobacter lari (strain RM2... [more]
KAD2_CAEBR8.279e-1330.39Adenylate kinase 2, mitochondrial OS=Caenorhabditi... [more]
KAD_PETMO1.081e-1229.09Adenylate kinase OS=Petrotoga mobilis (strain DSM ... [more]
KAD_SYNJB1.412e-1227.89Adenylate kinase OS=Synechococcus sp. GN=adk PE=3 ... [more]
KAD_STRMU1.412e-1229.09Adenylate kinase OS=Streptococcus mutans GN=adk PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873634 ID=FC873634; Name=FC873634; organism=Citrus clementina; type=EST; length=782bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTTTAAAAAAAAAAAAAAAAAAAA
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