FC873697

Overview
NameFC873697
Unique NameFC873697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.465e-58
Identity = 122/235 (51.91%), Postives = 149/235 (63.40%), Query Frame = 2
Query:  164 FSSVSSAFPPKPSLRF--SSPKNDNG-----------VVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            F++ + A  PKP L    +SP    G           VV  A+ + NN P+TGV+F PFEEVKK    +P     SLAR +F D  EA INEQINVEYNVSYVYH+M+AYFDRDNVA+KGL                K MEYQN+RGG+VKL  I+ P+SEF+HAEKGDALYAME                HKVA++NND QLADFVES++L EQ+EAIKKIS+Y+  LR + +G
Sbjct:    9 FTAANPALSPKPLLPHGSASPSVSLGFSRKVGGGRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKG 243          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.500e-58
Identity = 129/241 (53.53%), Postives = 149/241 (61.83%), Query Frame = 2
Query:  149 ALNPLFSSVSSAFPPKPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            AL P   S  S F PKPS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L +I    SEF+H EKGDALYAME                H VA++NND Q+ADF+ES++L EQVE+IKKISEYVA LRRV +G
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKG 238          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 225.328 bits (573), Expect = 3.264e-58
Identity = 129/241 (53.53%), Postives = 148/241 (61.41%), Query Frame = 2
Query:  149 ALNPLFSSVSSAFPPKPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            AL P   S  S F PKPS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++NND Q+ADF+ES++L EQVE+IKKISEYVA LRRV +G
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKG 238          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.240e-57
Identity = 115/205 (56.10%), Postives = 136/205 (66.34%), Query Frame = 2
Query:  206 RFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            R ++ ++   +   A+       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + ND QL DF+ES++L EQ EAI K+S+YVA LRRV
Sbjct:   29 RVTAQRSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRV 233          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.980e-55
Identity = 109/196 (55.61%), Postives = 136/196 (69.39%), Query Frame = 2
Query:  242 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            VCA+ +   +PLTGVIF PF+E+KK+   VP  P +SL+R  ++D+ EAAINEQINVEYNVSYVYH++FAYFDRDN+ALKGL                KL++YQN RGG+V L  I  P SEF+H EKGDALYAME                H VA++NND QLADF+ES++L+EQVE+IKKI+EYV  LR V +G
Sbjct:   48 VCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKG 243          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.762e-55
Identity = 113/191 (59.16%), Postives = 130/191 (68.06%), Query Frame = 2
Query:  257 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            +A+  PLTGVIF PFEEVKKE   VPT  Q+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++N D QLADF+ES++L EQVEAIKKISEYVA LR V +G
Sbjct:   47 SASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKG 237          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 5.762e-55
Identity = 110/191 (57.59%), Postives = 129/191 (67.54%), Query Frame = 2
Query:  257 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            +A  +PLTGVIF PFEEVKK+   VP+VP +SLAR  F D+CE+ INEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA +NND+++  F+E +YL EQVEAIKKISEYVA LRRV +G
Sbjct:   46 SATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKG 236          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.393e-53
Identity = 108/196 (55.10%), Postives = 133/196 (67.86%), Query Frame = 2
Query:  242 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            VCA+ NA  +PL GVIF PF+E+KK+   VP    + LAR  + DD E+AINEQINVEYNVSYVYHA+FAYFDRDN+ALKGL                +L++YQN RGG+V L  I  P SEF+H+EKGDALYAME                H VA +NND Q ADF+ES++L+EQV++IKKI+EYVA LR V +G
Sbjct:   46 VCAASNAP-APLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKG 240          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.303e-26
Identity = 65/162 (40.12%), Postives = 91/162 (56.17%), Query Frame = 2
Query:  347 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARGM 832
            +S AR  +  + EA IN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+YQNKRGG++ LQ I  P    D  E G  L AM+                HK+   ++D Q+ADF+ES++L EQV++IK++S+Y+ +L+RV  G+
Sbjct:    3 VSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGL 160          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_CHICK (Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.361e-24
Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  +  DCEAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A + ND  L DF+E+ YL EQV+AIK++ ++V +LR++
Sbjct:    6 SQVRQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKM 158          
The following BLAST results are available for this feature:
BLAST of FC873697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI1_ARATH1.465e-5851.91Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI_MALXI2.500e-5853.53Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN3.264e-5853.53Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI2_MAIZE1.240e-5756.10Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI3_VIGUN1.980e-5555.61Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI_PHAVU5.762e-5559.16Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI1_PEA5.762e-5557.59Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_SOYBN5.393e-5355.10Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRIS_LYMST4.303e-2640.12Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH_CHICK2.361e-2440.76Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873697 ID=FC873697; Name=FC873697; organism=Citrus clementina; type=EST; length=835bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGCAAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGATATCTGAGTATG
TTGCTCACCTGAGAAGAGTGGCCAGGGGCATGGTG
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