FC873721

Overview
NameFC873721
Unique NameFC873721
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length886
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS1_DROMA (Ras-like protein 1 OS=Drosophila mauritiana GN=Ras85D PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   ++ V  +LVGNKCDL A+  V+ E A+  A + GIP++ETSAK    V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-ASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS1_DROER (Ras-like protein 1 OS=Drosophila erecta GN=Ras85D PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   ++ V  +LVGNKCDL A+  V+ E A+  A + GIP++ETSAK    V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-ASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS1_DROAN (Ras-like protein 1 OS=Drosophila ananassae GN=Ras85D PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   ++ V  +LVGNKCDL A+  V+ E A+  A + GIP++ETSAK    V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-ASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS1_DROVI (Ras-like protein 1 OS=Drosophila virilis GN=Ras85D PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   ++ V  +LVGNKCDL A+  V  E A+  A + GIP++ETSAK    V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-ASWNVQNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: DJC27_CHICK (DnaJ homolog subfamily C member 27 OS=Gallus gallus GN=DNAJC27 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 50/167 (29.94%), Postives = 95/167 (56.89%), Query Frame = 3
Query:  153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-----DNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKD 638
            K++ +G++ VGKSC++ R+ +  ++  Y++TIG+D+ +  V+   + IK+ I+D AG   F  + + +Y+   G+I+VYDV  +ESF+ +  WL E+ +        DN+  ++  NK D T ++ V     + +A+  G  + ETSA+    + + F    ++I D
Sbjct:   18 KVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFDALDAWLAEMKQELGPHGNMDNIVFVVCANKIDCTKHRSVDESEGRLWAESRGFLYFETSAQTGEGINEMFQTFYSAIID 184          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RBL2A_PONAB (Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 61/172 (35.47%), Postives = 94/172 (54.65%), Query Frame = 3
Query:  153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFM-AMAASIKDRMASQPSMN 665
            K++ +GDS VGKS L+ RF  D +    +ST  +     T   DGKTI +  WDTAGQERF+++ +SYY  AH  I+V+DV  + ++ N+  W  E+  +  + +  L+V NK D   N     + +  FA +  +P    SA D TNV + F  A+  ++  +  SQ  M+
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSAWYTELREFRPE-IPCLVVANKIDADINVT---QKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMD 190          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS1_DROWI (Ras-like protein 1 OS=Drosophila willistoni GN=Ras85D PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 58/163 (35.58%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   ++ V  +LVGNKCDL +  V + E A+  A + GIP++ETSAK    V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLPSWNVQN-EQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS1_DROGR (Ras-like protein 1 OS=Drosophila grimshawi GN=Ras85D PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 58/163 (35.58%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   ++ V  +LVGNKCDL +  V + E A+  A + GIP++ETSAK    V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLPSWNVQN-EQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 51/170 (30.00%), Postives = 94/170 (55.29%), Query Frame = 3
Query:  153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS--------DNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKD 638
            K++ +G++ VGKSC++ R+ +  ++  Y +TIG+D+ +  V+   + IK+ I+D AG   F  + + +Y+   G+I+VYDV  +ESF ++  WL E+ +           DN+   +  NK D T ++ V     + +++  G  + ETSA+    + + F A  +SI D
Sbjct:   18 KVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLDNIVFAVCANKIDSTKHRCVDESEGRLWSESKGFLYFETSAQSGEGINEMFQAFYSSIVD 187          
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.193e-21
Identity = 57/172 (33.14%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  126 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-DNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKD 638
            M+ + D  +KL+++G  GVGKS L ++F    +++ Y  TI   ++ + V  D K   L I DTAGQE F  +   Y R   G ++V+ VTD+ SF+ + ++  +I R    +    +LVGNK DL   + VS   A+    ++ + ++E+SAK   NV+ AF  +  +I++
Sbjct:    1 MSGDLDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCVIDD-KVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQILRVKDIEEFPMILVGNKSDLENERTVSTAEAQELGRKLKVSYLESSAKQRINVDAAFHDLVRAIRN 171          
The following BLAST results are available for this feature:
BLAST of FC873721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_DROMA4.099e-2236.20Ras-like protein 1 OS=Drosophila mauritiana GN=Ras... [more]
RAS1_DROER4.099e-2236.20Ras-like protein 1 OS=Drosophila erecta GN=Ras85D ... [more]
RAS1_DROAN4.099e-2236.20Ras-like protein 1 OS=Drosophila ananassae GN=Ras8... [more]
RAS1_DROVI5.354e-2236.20Ras-like protein 1 OS=Drosophila virilis GN=Ras85D... [more]
DJC27_CHICK5.354e-2229.94DnaJ homolog subfamily C member 27 OS=Gallus gallu... [more]
RBL2A_PONAB6.992e-2235.47Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2... [more]
RAS1_DROWI9.132e-2235.58Ras-like protein 1 OS=Drosophila willistoni GN=Ras... [more]
RAS1_DROGR9.132e-2235.58Ras-like protein 1 OS=Drosophila grimshawi GN=Ras8... [more]
DJ27B_XENLA9.132e-2230.00DnaJ homolog subfamily C member 27-B OS=Xenopus la... [more]
RAS2_HYDMA1.193e-2133.14Ras-like protein RAS2 OS=Hydra magnipapillata GN=R... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CG11FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873721 ID=FC873721; Name=FC873721; organism=Citrus clementina; type=EST; length=886bp
TGTCTTCTGTTTTTGTTGACATTTAATTTCCCGGCGAAACTCATATCACG
AGATCTCGCCGAAGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTT
TTTTCTTTTACACAAATCTACGACGATGAATCCTGAATATGACTATCTGT
TTAAGCTTCTGCTTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTC
TTGAGATTTGCTGATGATTCATATATTGAGAGTTACATCAGCACCATAGG
AGTTGATTTTAAAATACGCACTGTTGAGCAAGATGGGAAGACCATTAAAC
TTCAAATTTGGGATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGC
AGCTACTACCGTGGGGCACATGGTATCATAATTGTTTATGATGTGACAGA
CCAAGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTT
ATGCTAGTGATAATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTC
ACTGCAAATAAGGTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGA
AATTGGAATACCTTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGG
AACAGGCATTCATGGCCATGGCTGCTTCAATCAAGGATAGAATGGCAAGT
CAACCATCCATGAACAATGCAAGGCCTCCAACTGTACAGATCAAAGGGCA
GCCTGTTGCACAGAAGAGTGGCTGCTGCTCTACTTAAGTATCATTGACCA
ACACTCAGAAGATGATCCCCCTTCAGTCCCTTTGTGGTTTATGAAAAAGG
CTGTACAAAGTAGAAATGCTAATTTGATGTTAGTATTCTTCTTTCTGTCC
CTATCTTTATTGGGAATTGGCCTTAATAGCATGTTT
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