FC873721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RASN_DANRE (GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21 Identity = 59/163 (36.20%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635 +KL+++G GVGKS L ++ + +++ Y TI ++ + V DG+T L I DTAGQE + + Y R G + V+ + + +SF +V + +I R SD+V +LVGN CDL + V + A+ A GI F+ETSAK VE AF + I+ Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADVHLYREQIKRVKDSDDVPMVLVGNICDLA--RTVDTKQAQELARSYGIEFVETSAKTRQGVEDAFYTLVREIR 163
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21 Identity = 49/167 (29.34%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-----DNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKD 638 K++ +G++ VGKSC++ R+ + ++ Y +TIG+D+ + V + IK+ I+D AG F + + +Y+ G+I+VYDV +E+F ++ WL E+ + DN+ + NK D T ++ V + +++ G + ETSA+ + + F A ++I D Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGPQGNIDNIVFAVCANKIDSTKHRSVDESEGRLWSESKGFLYFETSAQSGEGINEMFQAFYSAIVD 184
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20 Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 671 +L ++GD GVGK+ + ++F + ++ Y TI D + D + L I DTAGQ+ I + + + G I+VY VT + SF+ ++ +L++I S+ V +++ NK DL + V+Y+ + FA+ G+ FME SAK N+++ F +A R +N + Sbjct: 16 RLCVMGDGGVGKTSITIQFISNHFVNCYDPTIE-DLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIAQHCVKRRCDHIYINKS 187
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RASK_XENLA (GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20 Identity = 57/163 (34.97%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 635 +KL+++G GVGKS L ++ + +++ Y TI ++ + V DG+T L I DTAGQE + + Y R G + V+ + + +SF ++ + +I R S++V +LVGNKC L ++ V + A+ A GIPF+ETSAK V+ AF + I+ Sbjct: 4 YKLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNIKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCAL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIR 164
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB24_DICDI (Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20 Identity = 62/196 (31.63%), Postives = 99/196 (50.51%), Query Frame = 3 Query: 153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTAN---KVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPP-TVQIKGQPVAQKSGCC 728 K++L+G + VGK+C++ R+ + +++ +TIG F + V + L IWDTAG ER++ + SYYR A+ I+ YD+T++ES+ V W E+ + + + +VG K DL K V E K A ETS++ NV F +A R + + N+ P V + Q +K GCC Sbjct: 9 KVVLLGYASVGKTCIVTRYTSGQFGDTH-TTIGGAFSSKRVVVGETEVLLGIWDTAGTERYQAVNVSYYRRANAAIVCYDLTNRESWEKVTFWAEELTQNEPE-IEIYIVGTKLDLIQQGDIKAVPEEEVKQTARRYKAHIFETSSRTGENVSLLFQTIAEDFCKRTNNGTNPVNSNPSNVVNVNTQTQKKKGGCC 202
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RP1BL_HUMAN (Ras-related protein Rap-1b-like protein OS=Homo sapiens PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 58/163 (35.58%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SDNVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKDSTNVEQAFMAMAASI 632 +KL+++G GVGKS L ++F ++E Y TI ++ VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +D+V +LVGNKCDL +VV E + A + F+E+SAK NV + F + I Sbjct: 4 YKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYR-EQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 58/184 (31.52%), Postives = 99/184 (53.80%), Query Frame = 3 Query: 153 KLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNK---------LLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI--KDRMASQPSMNNA 671 KL+LIGD VGK+ +L R + E Y STIG DF +T Q+ +Q+WDTAGQE++ +TS+++R + +I+V+D++++ SF N+ W + + S ++N LL+ NK D V E + D + E SAK S N++++ + + I +D+ + N++ Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQ---FKSKSINPDGTEKQLPILLLANKSDSLTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIEQDKDSDNEQFNDS 191
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 61/167 (36.53%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-DNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKD-STNVEQAFMAMAASIKDRM 644 +KL+++GD GVGKS L ++F ++ Y TI D ++ E D + L + DTAGQE F + Y R G +IVY VTD+ SF +V ++ I R ++ +LV NK DL + ++ E K A + IP++ETSAKD NV++AF + I+ ++ Sbjct: 14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQI 179
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 56/185 (30.27%), Postives = 98/185 (52.97%), Query Frame = 3 Query: 135 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQ 689 E +FKL+LIGD G GK+ L+ R + Y +T+GV+ + + ++ +WDTAGQER+ + Y+ + II++DV ++NNVK+W ++ R N+ ++ GNK D+ K +++ F + I +E SAK + NVE+ F+ + ++ PS+ + P +Q Sbjct: 6 EVKAIFKLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDLVRVCG-NIPIVICGNKVDIMHKK--TWKKGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLLR----KLVGDPSLQLVQSPAIQ 183
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: GSP1_YEAST (GTP-binding nuclear protein GSP1/CNR1 OS=Saccharomyces cerevisiae GN=GSP1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 3 Query: 150 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN-----NARPPTVQIKGQPVAQ 713 FKL+L+GD G GK+ + R + + YI+TIGV+ + + IK +WDTAGQE+F + YY A II++DVT + ++ NV W ++ R +N+ +L GNK D+ KV + F + + + + SAK + N E+ F+ +A ++A P + PP VQ+ Q + Q Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLAR----KLAGNPQLEFVASPALAPPEVQVDEQLMQQ 198 The following BLAST results are available for this feature:
BLAST of FC873721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873721 ID=FC873721; Name=FC873721; organism=Citrus clementina; type=EST; length=886bpback to top |