FC873721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.823e-54 Identity = 103/200 (51.50%), Postives = 145/200 (72.50%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQP--SMNNARPPTVQI-KGQPVAQKSGCC 728 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+TV+ +GK +KLQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW ++ +A+D LLVGNK D+ +VV+ + +A A E+GIPF+E+SAK+ NV + F +A I++++ S + N + + I G + KS CC Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSKSNCC 215
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.823e-54 Identity = 105/198 (53.03%), Postives = 141/198 (71.21%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 728 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + N+E+AF+ +A I + +P+ N + G KS CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.823e-54 Identity = 105/198 (53.03%), Postives = 141/198 (71.21%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 728 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + N+E+AF+ +A I + +P+ N + G KS CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.823e-54 Identity = 105/198 (53.03%), Postives = 141/198 (71.21%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 728 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + N+E+AF+ +A I + +P+ N + G KS CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.381e-54 Identity = 105/198 (53.03%), Postives = 141/198 (71.21%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 728 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + N+E+AF+ +A I + +P+ N + G KS CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.062e-54 Identity = 110/180 (61.11%), Postives = 138/180 (76.67%), Query Frame = 3 Query: 126 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI----KDRMASQ 653 M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT ESF NVK+WL+EI++ D+V ++LVGNK D KVV E A FA ++GI ETSAK++ NVE+ F + + KD +A Q Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.062e-54 Identity = 110/180 (61.11%), Postives = 138/180 (76.67%), Query Frame = 3 Query: 126 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI----KDRMASQ 653 M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT ESF NVK+WL+EI++ D+V ++LVGNK D KVV E A FA ++GI ETSAK++ NVE+ F + + KD +A Q Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.062e-54 Identity = 110/180 (61.11%), Postives = 138/180 (76.67%), Query Frame = 3 Query: 126 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI----KDRMASQ 653 M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT ESF NVK+WL+EI++ D+V ++LVGNK D KVV E A FA ++GI ETSAK++ NVE+ F + + KD +A Q Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.304e-54 Identity = 104/198 (52.53%), Postives = 140/198 (70.71%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 728 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+D KI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + N+E+AF+ +A I + +P+ N + G KS CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53 Identity = 104/199 (52.26%), Postives = 139/199 (69.85%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM-ASQPSMNNARPPTVQIKGQPVAQKSGCCS 731 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E I F ETSAK + N+E+AF+ +A I + +P N + G K CCS Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVKEPDRENV---DISTTGGGTGLKK-CCS 200 The following BLAST results are available for this feature:
BLAST of FC873721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873721 ID=FC873721; Name=FC873721; organism=Citrus clementina; type=EST; length=886bpback to top |