FC873721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 92/188 (48.94%), Postives = 136/188 (72.34%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQ 701 +DY+FKLL+IG+S VGK+ L R+ DDS+ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W +I Y+ +N +LVGNKCD+ + +VVS + + AD++G+ F ETSAK++ NV+ F + I D+MA + P Q KGQ Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLD----KDPQQQPKGQ 202
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 95/200 (47.50%), Postives = 142/200 (71.00%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGC 725 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +V+S E + +++G F ETSAKD+ NV+Q F + I D+M+ + P++ A+ T ++K P + C Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 95/200 (47.50%), Postives = 142/200 (71.00%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGC 725 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +V+S E + +++G F ETSAKD+ NV+Q F + I D+M+ + P++ A+ T ++K P + C Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 95/200 (47.50%), Postives = 141/200 (70.50%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGC 725 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +L GNKCD+ +VVS E + +++G F ETSAKD+ NV+Q F + I D+M+ + P++ A+ T ++K P + C Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 95/200 (47.50%), Postives = 141/200 (70.50%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGC 725 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +L GNKCD+ +VVS E + +++G F ETSAKD+ NV+Q F + I D+M+ + P++ A+ T ++K P + C Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 93/201 (46.27%), Postives = 140/201 (69.65%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 728 +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ A T P+ Q++ C Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 93/201 (46.27%), Postives = 140/201 (69.65%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 728 +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ A T P+ Q++ C Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 97/202 (48.02%), Postives = 134/202 (66.34%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM------ASQPSMNNARPPTVQIKGQPVAQKSGC 725 +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ DN +LVGNKCDL +VV E + AD++G F E SAK++ NV+Q F + I D+M +S P N P + P Q S C Sbjct: 19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP---ALGDTPPPQPSSC 217
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 92/201 (45.77%), Postives = 140/201 (69.65%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 728 +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +V+ E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ A T P+ Q++ C Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
BLAST of FC873721 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 93/201 (46.27%), Postives = 140/201 (69.65%), Query Frame = 3 Query: 138 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 728 +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PSM + T P+ Q++ C Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219 The following BLAST results are available for this feature:
BLAST of FC873721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873721 ID=FC873721; Name=FC873721; organism=Citrus clementina; type=EST; length=886bpback to top |