FC873725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCA_YEAST (Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=LSC1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.456e-12 Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNK----PVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKDTFGK 381 I +GGD FPG+ D + F + +++LGE+GG+ E + LK+ ++ PV ++++GT A K V+ GH+GA G A++K QALRD G V S A+ D F K Sbjct: 206 IGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMPVASFIAGTVAGQMKG-VRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQFAK 327
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCD1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus fulgidus GN=sucD1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 330 + IGGD PG T D + F + K ++++GE+GG E E +KQ ++KPVVA+++G A K + GHAGA G +A+AK ALRDAGA V Sbjct: 179 VGIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ--MSKPVVAFIAGRTAPPGK---RMGHAGAIIEGSTGTAEAKMAALRDAGARV 275
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCA_ORYSJ (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKDTF 375 + IGGD F G+ D + +F + PQ + +V++GE+GG E +++ K KPVVA+++G A + + GHAGA G +AQ K +ALR+AG V S S + + F Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKTQKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 324
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCD_RICCN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia conorii GN=sucD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKDTFGK 381 I IGGD G+ D I F + K ++++GE+GG E E +KQ K+ KP+V++++G A K + GHAGA G SA+ K +AL+ AG ++ S + D K Sbjct: 176 IGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLLNK 291
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCD_RICTY (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia typhi GN=sucD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKDTFGKL 384 I IGGD G++ + I F + K ++++GE+GG E + +KQ K+ KP+V++++G A S+ + GHAGA G SA+ K +AL+ AG + S + D K+ Sbjct: 176 IGIGGDPVNGTSFVECIEMFLQDDETKAIIMIGEIGGNAEEDAADFIKQSKIKKPIVSFIAGITA---PSDKRMGHAGAIISGGKGSAKDKLEALQSAGVTITKSPADIGKTMLDLLNKI 292
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCD_RICPR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia prowazekii GN=sucD PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 37/120 (30.83%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKDTFGKL 384 + IGGD G++ D I F + K ++++GE+GG E + +KQ K+ KP+V++++G A ++ + GHAGA G SA+ K + L+ AG ++ S + D K+ Sbjct: 176 VGIGGDPVNGTSFVDCIEMFLQDDETKAIIMIGEIGGSAEEDAADFIKQSKIKKPIVSFIAGITA---PADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRSPADIGKTMLDLLNKI 292
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCA2_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=At5g23250 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKDTF 375 + IGGD F G+ D + +F PQ + +V++GE+GG E +K+ +KPVVA+++G A + + GHAGA G +AQ K ++LRDAG V S +A+ + F Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKENGTDKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELF 334
BLAST of FC873725 vs. ExPASy Swiss-Prot
Match: SUCD_RICFE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis GN=sucD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11 Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 25 IAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 339 + IGGD G+ D I F + K ++++GE+GG E E +KQ K+ KP+V++++G A K + GHAGA G SA+ K +AL+ AG + S Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIAGGKGSAEDKLEALQSAGVTITRS 277 The following BLAST results are available for this feature:
BLAST of FC873725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873725 ID=FC873725; Name=FC873725; organism=Citrus clementina; type=EST; length=741bpback to top |