FC873734

Overview
NameFC873734
Unique NameFC873734
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length795
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_STRP3 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M3 GN=ppc PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25
Identity = 81/275 (29.45%), Postives = 134/275 (48.73%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEI-GSYREWSEEKRQEWLLSELSGK-RPLFGPDLPKTEEIADVLETFHVIAELPADNFGA-----YIISMATAPSDVLAVELLQRECHV----KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            +SL   G+ A+ +G L + ++ V  FG  L  +D+RQ+S      +  + K   I   Y   SE ++ + LL +L  + R L    + K++ +   L  +    EL  D  G      +IIS   + SD+  + ++ +E  +    +  +++VPLFE                S D  ++ I      QE+M+GYSDS KD G  ++ W LYKAQ EL  + +++G+K+T FH           P++ AI SQP  +I   +R+T  GE+IE  +
Sbjct:  385 QSLLDNGNSALIEGDLREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLLQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELK-DKLGEEVIKQHIISHTESVSDMFELAIMLKEVGLVDQQRARVQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRNYQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRIRLTEQGEIIENKY 658          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_STRP1 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M1 GN=ppc PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25
Identity = 81/275 (29.45%), Postives = 134/275 (48.73%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEI-GSYREWSEEKRQEWLLSELSGK-RPLFGPDLPKTEEIADVLETFHVIAELPADNFGA-----YIISMATAPSDVLAVELLQRECHV----KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            +SL   G+ A+ +G L + ++ V  FG  L  +D+RQ+S      +  + K   I   Y   SE ++ + LL +L  + R L    + K++ +   L  +    EL  D  G      +IIS   + SD+  + ++ +E  +    +  +++VPLFE                S D  ++ I      QE+M+GYSDS KD G  ++ W LYKAQ EL  + +++G+K+T FH           P++ AI SQP  +I   +R+T  GE+IE  +
Sbjct:  385 QSLLDNGNSALIEGDLREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLLQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELK-DKLGEEVIKQHIISHTESVSDMFELAIMLKEVGLVDQQRARVQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRNYQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRIRLTEQGEIIENKY 658          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_STRMU (Phosphoenolpyruvate carboxylase OS=Streptococcus mutans GN=ppc PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25
Identity = 84/273 (30.77%), Postives = 128/273 (46.89%), Query Frame = 3
Query:   15 SLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRH-TDVIDAITKHLEIGSYREWSEEKRQEWLLSELS-GKRPLFGPDLPKTEEIADVLETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHV----KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            SL      A   G L + L+ V  FG  L  +D+RQ+S  H T V + +     + +Y +  EE++   LL EL+   R L    + K+E +   L  F    +L      D    +IIS   + SD+  + ++ +E  +    K  +++VPLFE                + D  +  I   +  QE+M+GYSDS KD G  S+ W LYKAQ EL ++    G+K+T FH           P++ AI SQP  +I   +R+T  GEVI   +
Sbjct:  373 SLLENNGSAFITGDLTELLQAVDVFGFFLASIDMRQDSSVHETCVAELLASANIVANYSDLPEEEKIAILLKELTEDPRILSATHVEKSEILQKELAIFKTARKLKDALGEDVIKQHIISHTESISDMFELAIMLKEVGLVDTDKARVQIVPLFETIEDLDNSREIMRQYLNYDIVKKWIAANHNYQEIMLGYSDSNKDGGYLSSGWALYKAQNELTEIGYDNGVKITFFHGRGGTVGRGGGPSYEAITSQPFGSIKDRIRLTEQGEVIGNKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_STRPG (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=ppc PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 80/275 (29.09%), Postives = 134/275 (48.73%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEI-GSYREWSEEKRQEWLLSELSGK-RPLFGPDLPKTEEIADVLETFHVIAELPADNFGA-----YIISMATAPSDVLAVELLQRECHV----KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            +SL   G+ A+ +G L + ++ V  FG  L  +D+RQ+S      +  + K   I   Y   SE ++ + L+ +L  + R L    + K++ +   L  +    EL  D  G      +IIS   + SD+  + ++ +E  +    +  +++VPLFE                S D  ++ I      QE+M+GYSDS KD G  ++ W LYKAQ EL  + +++G+K+T FH           P++ AI SQP  +I   +R+T  GE+IE  +
Sbjct:  385 QSLLDNGNSALIEGDLREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLVQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELK-DKLGEEVIKQHIISHTESVSDMFELAIMLKEVGLVDQQRARVQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRNYQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRIRLTEQGEIIENKY 658          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_STRP8 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M18 GN=ppc PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 80/275 (29.09%), Postives = 134/275 (48.73%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEI-GSYREWSEEKRQEWLLSELSGK-RPLFGPDLPKTEEIADVLETFHVIAELPADNFGA-----YIISMATAPSDVLAVELLQRECHV----KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            +SL   G+ A+ +G L + ++ V  FG  L  +D+RQ+S      +  + K   I   Y   SE ++ + L+ +L  + R L    + K++ +   L  +    EL  D  G      +IIS   + SD+  + ++ +E  +    +  +++VPLFE                S D  ++ I      QE+M+GYSDS KD G  ++ W LYKAQ EL  + +++G+K+T FH           P++ AI SQP  +I   +R+T  GE+IE  +
Sbjct:  385 QSLLDNGNSALIEGDLREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLVQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELK-DKLGEEVIKQHIISHTESVSDMFELAIMLKEVGLVDQQRARVQIVPLFETIEDLDNACDIMAAYLSHDIVKSWIATNRNYQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRIRLTEQGEIIENKY 658          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_STRP6 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M6 GN=ppc PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 80/275 (29.09%), Postives = 134/275 (48.73%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEI-GSYREWSEEKRQEWLLSELSGK-RPLFGPDLPKTEEIADVLETFHVIAELPADNFGA-----YIISMATAPSDVLAVELLQRECHV----KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRI---NGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            +SL   G+ A+ +G L + ++ V  FG  L  +D+RQ+S      +  + K   I   Y   SE ++ + L+ +L  + R L    + K++ +   L  +    EL  D  G      +IIS   + SD+  + ++ +E  +    +  +++VPLFE                S D  ++ I      QE+M+GYSDS KD G  ++ W LYKAQ EL  + +++G+K+T FH           P++ AI SQP  +I   +R+T  GE+IE  +
Sbjct:  385 QSLLDNGNSALIEGDLREVMQAVDIFGFFLASIDMRQDSSVQEACVAELLKGANIVDDYSSLSETEKCDVLVQQLMEEPRTLSSAAVAKSDLLEKELAIYTTARELK-DKLGEEVIKQHIISHTESVSDMFELAIMLKEVGLVDQQRARVQIVPLFETIEDLDNARDIMAAYLSHDIVKSWIATNRNYQEIMLGYSDSNKDGGYLASGWTLYKAQNELTAIGEEHGVKITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRIRLTEQGEIIENKY 658          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_BORPA (Phosphoenolpyruvate carboxylase OS=Bordetella parapertussis GN=ppc PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.399e-23
Identity = 85/264 (32.20%), Postives = 116/264 (43.94%), Query Frame = 3
Query:   78 VSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIG------SYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAY-----IISMATAPSDVLAVELLQRECHVKQP----------LRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRIN----GKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            V+ FG  L  +D+RQ SD H  V+  +      G       Y    E  R   L  EL+  RPL  P +  +EE A  L      A   A  +G       I+S     SD+L V +LQ+E  +  P          L VVPLFE                 +   R R+       QEVM+GYSDS KD G  ++ W LY+A+  L+ V     ++L MFH            ++ AIL+QPP T+ G LR+T  GEVI+  +
Sbjct:  440 VTVFGFHLATVDLRQSSDVHERVLAELFARAGDGIDGQAVDYLALDEAARVAVLRRELAHARPLASPWIAYSEETASELAVLRAAAAGRA-RYGRQAVLQSIVSHTETLSDLLEVLVLQKEAGLIAPPGETIAPGDGLMVVPLFETIPDLQRGPEIMAAWLDLPEVRQRVRLAQGDTQEVMLGYSDSNKDGGFLTSNWSLYQAERALVDVFSARSVRLRMFHGRGGSVGRGGGSSYDAILAQPPGTVAGQLRLTEQGEVIQSKY 702          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_BORBR (Phosphoenolpyruvate carboxylase OS=Bordetella bronchiseptica GN=ppc PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.399e-23
Identity = 85/264 (32.20%), Postives = 116/264 (43.94%), Query Frame = 3
Query:   78 VSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIG------SYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAY-----IISMATAPSDVLAVELLQRECHVKQP----------LRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRIN----GKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            V+ FG  L  +D+RQ SD H  V+  +      G       Y    E  R   L  EL+  RPL  P +  +EE A  L      A   A  +G       I+S     SD+L V +LQ+E  +  P          L VVPLFE                 +   R R+       QEVM+GYSDS KD G  ++ W LY+A+  L+ V     ++L MFH            ++ AIL+QPP T+ G LR+T  GEVI+  +
Sbjct:  440 VTVFGFHLATVDLRQSSDVHERVLAELFARAGDGIDGQAVDYLALDEAARVAVLRRELAHARPLASPWIAYSEETASELAVLRAAAAGRA-RYGRQAVLQSIVSHTETLSDLLEVLVLQKEAGLIAPPGETIAPGDGLMVVPLFETIPDLQRGPEIMAAWLDLPEVRQRVRLAQGDTQEVMLGYSDSNKDGGFLTSNWSLYQAERALVDVFSARSVRLRMFHGRGGSVGRGGGSSYDAILAQPPGTVAGQLRLTEQGEVIQSKY 702          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_THET8 (Phosphoenolpyruvate carboxylase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ppc PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.184e-22
Identity = 88/273 (32.23%), Postives = 125/273 (45.79%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGS----YREWSEEKRQEWLLSELSGKRPLFGP-DLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLR-----VVPLFEKXXXXXXXXXXXXXXFS--VDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            R L   G   +A+  L     ++S FGL L  LD+R+ES R   +++A  + L +G     +    +E+R+  L  EL   RPL    + P+ E +   L       +      GA+++SM   P D+LAV LL RE  + +P R     VVPLFE                   V     R  G  EVMIGYSDS KDAG   A   LY+AQE L +V ++ G+ +  FH           P   AI S PP ++   +R+T  GE +   +
Sbjct:  342 RGLREVGLGRVAEAFLDPLEARLSAFGLELAPLDLREESGR---LLEAAAELLRVGGVHPDFLALPQEERERLLTEELKTARPLLPVGEAPEGEALRVALGALKAWRDK-----GAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPLPFDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPVYFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRY 606          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_THET2 (Phosphoenolpyruvate carboxylase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ppc PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.184e-22
Identity = 88/273 (32.23%), Postives = 125/273 (45.79%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGS----YREWSEEKRQEWLLSELSGKRPLFGP-DLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLR-----VVPLFEKXXXXXXXXXXXXXXFS--VDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            R L   G   +A+  L     ++S FGL L  LD+R+ES R   +++A  + L +G     +    +E+R+  L  EL   RPL    + P+ E +   L       +      GA+++SM   P D+LAV LL RE  + +P R     VVPLFE                   V     R  G  EVMIGYSDS KDAG   A   LY+AQE L +V ++ G+ +  FH           P   AI S PP ++   +R+T  GE +   +
Sbjct:  342 RGLREVGLGRVAEAFLDPLEARLSAFGLELAPLDLREESGR---LLEAAAELLRVGGVHPDFLALPQEERERLLTEELKTARPLLPVGEAPEGEALRVALGALKAWRDK-----GAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPLPFDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPVYFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRY 606          
The following BLAST results are available for this feature:
BLAST of FC873734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_STRP37.419e-2529.45Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP17.419e-2529.45Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRMU7.419e-2530.77Phosphoenolpyruvate carboxylase OS=Streptococcus m... [more]
CAPP_STRPG1.653e-2429.09Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP81.653e-2429.09Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP61.653e-2429.09Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_BORPA1.399e-2332.20Phosphoenolpyruvate carboxylase OS=Bordetella para... [more]
CAPP_BORBR1.399e-2332.20Phosphoenolpyruvate carboxylase OS=Bordetella bron... [more]
CAPP_THET81.184e-2232.23Phosphoenolpyruvate carboxylase OS=Thermus thermop... [more]
CAPP_THET21.184e-2232.23Phosphoenolpyruvate carboxylase OS=Thermus thermop... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873734 ID=FC873734; Name=FC873734; organism=Citrus clementina; type=EST; length=795bp
AACTCTGTTATAGGTCACTCTGCTCTTGCGGTGACCGAGCGATTGCTGAT
GGAAGCCTTCTCGATTTCTTGAGGCAAGTCTCCACCTTCGGACTCTCACT
TGTCAGGCTTGATATCAGGCAAGAGTCTGATCGTCATACTGATGTCATAG
ATGCCATCACCAAGCACCTGGAAATTGGTTCCTACCGAGAATGGTCTGAA
GAAAAGAGGCAGGAATGGCTTTTATCTGAACTCAGTGGCAAGCGTCCACT
GTTTGGCCCTGACCTTCCTAAAACTGAAGAAATTGCTGATGTTTTGGAGA
CATTTCATGTCATAGCTGAACTTCCAGCTGATAATTTTGGAGCATACATC
ATATCGATGGCAACAGCACCATCTGATGTGCTGGCTGTTGAACTCCTACA
GCGTGAATGCCATGTGAAACAACCACTTAGAGTTGTTCCACTTTTTGAGA
AGCTTGCAGATTTGGAGGCAGCACCTGCTGCTCTGGCCCGACTCTTTTCA
GTCGATTGGTACAGGAATCGGATCAATGGTAAGCAAGAAGTCATGATTGG
GTACTCAGATTCTGGTAAAGATGCTGGGCGATTCTCGGCTGCCTGGCAGT
TATACAAGGCTCAAGAGGAGCTTATAAAGGTAGCAAAGCAATATGGTATA
AAACTAACCATGTTCCATGGTCGTGGTGGAACTGTTGGAAGAGGAGGTGG
TCCCACCCATCTTGCCATATTGTCTCAACCACCAGATACAATTCATGGCT
CACTGCGTGTTACTGTTTCAGGTGAAGTTATTGAGCAATCATTTG
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