FC873734

Overview
NameFC873734
Unique NameFC873734
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length795
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_XANC5 (Phosphoenolpyruvate carboxylase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ppc PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.020e-22
Identity = 86/258 (33.33%), Postives = 122/258 (47.29%), Query Frame = 3
Query:   69 LRQVSTFGLSLVRLDIRQESDRHTDVI-DAITKHLEIGSYREWSEE---KRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHVKQ-----PLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK---QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            L +V +FG  L RLD+RQES  H   + DA+ +        +W  +   +R   L    +G+ PL   D    E  A +   F  +A+      AD  G+YIISMA   +DVL V  L R   +       PL +VPLFE                +   YR  +  +   Q VM+GYSDSGKD G  ++ W L +AQ EL++ A + G++LT FH            T  A+ + P  ++ G LRVT  GEVI + +
Sbjct:  398 LWRVRSFGFHLARLDVRQESSVHARAVADALGQ-------TDWDAQDATQRAAVLGPYAAGQEPLPRVD---DEGNARLDAVFAALADARTRHGADALGSYIISMAHNRADVLTVLALARRGGLVDDAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAAELGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEVIHRKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_XANCP (Phosphoenolpyruvate carboxylase OS=Xanthomonas campestris pv. campestris GN=ppc PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 83/263 (31.56%), Postives = 121/263 (46.01%), Query Frame = 3
Query:   69 LRQVSTFGLSLVRLDIRQESDRHTDVI-DAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGP------DLPKTEEIADVL--ETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHVKQ-----PLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK---QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            L +V +FG  L RLD+RQES  H   + DA+ +                +W   + + +  L GP       LP+ ++  +      F  +A+      AD  G+YIISMA   +DVL V  L R   +       PL +VPLFE                +   YR  +  +   Q VM+GYSDSGKD G  ++ W L +AQ EL++ A + G++LT FH            T  A+ + P  ++ G LRVT  GEVI + +
Sbjct:  398 LWRVRSFGFHLARLDVRQESSVHARAVADALGQ---------------ADWDSQDATHRAGLLGPYASGEQALPQVDDEGNARLDAVFAALADARTRHGADALGSYIISMAHNRADVLTVLALARRGGLVDDAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLRARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAAELGVRLTFFHGRGGSIVRGGGKTTRALDAAPRGSVDGRLRVTEQGEVIHRKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_XANC8 (Phosphoenolpyruvate carboxylase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ppc PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 83/263 (31.56%), Postives = 121/263 (46.01%), Query Frame = 3
Query:   69 LRQVSTFGLSLVRLDIRQESDRHTDVI-DAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGP------DLPKTEEIADVL--ETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHVKQ-----PLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK---QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            L +V +FG  L RLD+RQES  H   + DA+ +                +W   + + +  L GP       LP+ ++  +      F  +A+      AD  G+YIISMA   +DVL V  L R   +       PL +VPLFE                +   YR  +  +   Q VM+GYSDSGKD G  ++ W L +AQ EL++ A + G++LT FH            T  A+ + P  ++ G LRVT  GEVI + +
Sbjct:  398 LWRVRSFGFHLARLDVRQESSVHARAVADALGQ---------------ADWDSQDATHRAGLLGPYASGEQALPQVDDEGNARLDAVFAALADARTRHGADALGSYIISMAHNRADVLTVLALARRGGLVDDAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLRARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAAELGVRLTFFHGRGGSIVRGGGKTTRALDAAPRGSVDGRLRVTEQGEVIHRKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_XANAC (Phosphoenolpyruvate carboxylase OS=Xanthomonas axonopodis pv. citri GN=ppc PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22
Identity = 82/263 (31.18%), Postives = 121/263 (46.01%), Query Frame = 3
Query:   69 LRQVSTFGLSLVRLDIRQESDRHTDVI-DAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGP------DLPKTEEIADVL--ETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHVKQ-----PLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK---QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            L +V +FG  L RLD+RQES  H   + DA+ +                +W   + + +  + GP       LP+ ++  +      F  +A+      AD  G+YIISMA   +DVL V  L R   +       PL +VPLFE                +   YR  +  +   Q VM+GYSDSGKD G  ++ W L +AQ EL++ A + G++LT FH            T  A+ + P  ++ G LRVT  GEVI + +
Sbjct:  398 LWRVRSFGFHLARLDVRQESSVHARAVADALGQ---------------TDWDAQDATQRAAVLGPYAAGQDPLPRVDDEGNARLDAVFAALADARTRHGADALGSYIISMAHNRADVLTVLALARRGGLVDDAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAAELGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEVIHRKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_THES7 (Phosphoenolpyruvate carboxylase OS=Thermus sp. (strain 71) GN=ppc PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 85/273 (31.14%), Postives = 125/273 (45.79%), Query Frame = 3
Query:   12 RSLCSCGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIGS----YREWSEEKRQEWLLSELSGKRPLFGP-DLPKTEEIADVLETFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKQPLR-----VVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGKQ--EVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            + L   G   +A   L     ++S FGL L  LD+R+ES +   +++A  + L +G     +   S E+++  L  EL   RPL    ++P+ E +   L       +      GA+++SM   P+D+LAV LL RE  + +P +     VVPLFE                +   +R    G+   EVMIGYSDS KDAG   A   LY+AQE L  V +  GI +  FH           P   AI   PP ++   LR+T  GE +   +
Sbjct:  341 KGLEGVGLAQVAQAFLRPLEARLSAFGLELAPLDLREESGK---LLEAAAELLRLGGVHPDFLALSPEEKEALLTEELKTARPLLPVGEVPQGEALRVALGALRAWGDK-----GAHVVSMTHHPADLLAVFLLAREVGLYRPGKPLPFDVVPLFETLEDLERAPEVLRRLLANPVFRAHAQGRGGVEVMIGYSDSNKDAGFLMANLALYQAQEALHAVGEAQGIPVFFFHGRGTSTARGGGPAGRAIAGLPPKSVGHRLRLTEQGEALADRY 605          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_BORPE (Phosphoenolpyruvate carboxylase OS=Bordetella pertussis GN=ppc PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.878e-22
Identity = 84/264 (31.82%), Postives = 115/264 (43.56%), Query Frame = 3
Query:   78 VSTFGLSLVRLDIRQESDRHTDVIDAITKHLEIG------SYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADNFGAY-----IISMATAPSDVLAVELLQRECHVKQP----------LRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRIN----GKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            V+ FG  L  +D+RQ SD H  V+  +      G       Y    E  R      EL+  RPL  P +  +EE A  L      A   A  +G       I+S     SD+L V +LQ+E  +  P          L VVPLFE                 +   R R+       QEVM+GYSDS KD G  ++ W LY+A+  L+ V     ++L MFH            ++ AIL+QPP T+ G LR+T  GEVI+  +
Sbjct:  440 VTVFGFHLATVDLRQSSDVHERVLAELFARAGDGIDGQAVDYLALDEAARVAG--RELAHARPLASPWIAYSEETASELAVLRAAAAGRA-RYGRQAVLQSIVSHTETLSDLLEVLVLQKEAGLIAPPGETIAPGDGLMVVPLFETIPDLQRGPEIMAAWLDLPEVRQRVRLAQGDTQEVMLGYSDSNKDGGFLTSNWSLYQAERALVDVFSARSVRLRMFHGRGDSVGRGGGSSYDAILAQPPGTVAGQLRLTEQGEVIQSKY 700          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_XANOR (Phosphoenolpyruvate carboxylase OS=Xanthomonas oryzae pv. oryzae GN=ppc PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.677e-22
Identity = 82/263 (31.18%), Postives = 120/263 (45.63%), Query Frame = 3
Query:   69 LRQVSTFGLSLVRLDIRQESDRHTDVI-DAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGP------DLPKTEEIADVL--ETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHVKQ-----PLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK---QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            L +V +FG  L RLD+RQES  H   + DA+ +                +W   + + +  + GP       LP+ ++  +      F  +A+      AD  G+YIISMA   +DVL V  L R   +       PL +VPLFE                +   YR  +  +   Q VM+GYSDSGKD G  ++ W L +AQ EL++ A   G++LT FH            T  A+ + P  ++ G LRVT  GEVI + +
Sbjct:  398 LWRVRSFGFHLARLDVRQESSVHARAVADALGQ---------------TDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRHGADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEVIHRKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_XANOM (Phosphoenolpyruvate carboxylase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ppc PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.677e-22
Identity = 82/263 (31.18%), Postives = 120/263 (45.63%), Query Frame = 3
Query:   69 LRQVSTFGLSLVRLDIRQESDRHTDVI-DAITKHLEIGSYREWSEEKRQEWLLSELSGKRPLFGP------DLPKTEEIADVL--ETFHVIAELP----ADNFGAYIISMATAPSDVLAVELLQRECHVKQ-----PLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK---QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            L +V +FG  L RLD+RQES  H   + DA+ +                +W   + + +  + GP       LP+ ++  +      F  +A+      AD  G+YIISMA   +DVL V  L R   +       PL +VPLFE                +   YR  +  +   Q VM+GYSDSGKD G  ++ W L +AQ EL++ A   G++LT FH            T  A+ + P  ++ G LRVT  GEVI + +
Sbjct:  398 LWRVRSFGFHLARLDVRQESSVHARAVADALGQ---------------TDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRHGADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEVIHRKY 645          
BLAST of FC873734 vs. ExPASy Swiss-Prot
Match: CAPP_CAUCR (Phosphoenolpyruvate carboxylase OS=Caulobacter crescentus GN=ppc PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.917e-21
Identity = 80/270 (29.63%), Postives = 124/270 (45.93%), Query Frame = 3
Query:   30 GDRAIADGSLLDFLRQVS-TFGLSLVRLDIRQESDRHTDVIDAITKHLEIG-SYREWSEEKRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPADN----FGAYIISMATAPSDVLAVELLQRECHV-------KQPLRVVPLFEKXXXXXXXXXXXXXXFSVDWYRNRINGK--QEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKQYGIKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVSGEVIEQSF 794
            G+R +  GS L  L +V+   G  L+ LD+RQ +D H   +D + +    G  Y +  E+ R + L+ ELS +RPL  P     EE +  L T    A+   D      GAYIIS +   SD+L   +L ++  +       +  ++V PLFE                 +   R  +  +  QE+M+GYSDS KD G  ++   +      L   A + G+ L +FH           P   A+L+QP  T+ G +R+T  GE+I + F
Sbjct:  386 GERLV--GSALRTLVEVAKACGFHLMSLDLRQNADVHERTLDELFRRAGTGVEYLKLDEDARCKVLIDELSHQRPLVSPFTAYGEETSKELATMEAAAQAVRDYGHGCLGAYIISKSATLSDMLEPLVLLKQVGLVWGGAAPRASVKVAPLFETIGDLENGPAVLRQWLELPLSRTILGDRPVQEIMLGYSDSNKDGGYVASRRGVATGASALAHEADRMGVGLQLFHGRGGSVGRGGGPAAEAVLAQPAGTVQGRIRMTEQGEMIARRF 653          
The following BLAST results are available for this feature:
BLAST of FC873734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_XANC52.020e-2233.33Phosphoenolpyruvate carboxylase OS=Xanthomonas cam... [more]
CAPP_XANCP3.446e-2231.56Phosphoenolpyruvate carboxylase OS=Xanthomonas cam... [more]
CAPP_XANC83.446e-2231.56Phosphoenolpyruvate carboxylase OS=Xanthomonas cam... [more]
CAPP_XANAC3.446e-2231.18Phosphoenolpyruvate carboxylase OS=Xanthomonas axo... [more]
CAPP_THES75.878e-2231.14Phosphoenolpyruvate carboxylase OS=Thermus sp. (st... [more]
CAPP_BORPE5.878e-2231.82Phosphoenolpyruvate carboxylase OS=Bordetella pert... [more]
CAPP_XANOR7.677e-2231.18Phosphoenolpyruvate carboxylase OS=Xanthomonas ory... [more]
CAPP_XANOM7.677e-2231.18Phosphoenolpyruvate carboxylase OS=Xanthomonas ory... [more]
CAPP_CAUCR2.917e-2129.63Phosphoenolpyruvate carboxylase OS=Caulobacter cre... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873734 ID=FC873734; Name=FC873734; organism=Citrus clementina; type=EST; length=795bp
AACTCTGTTATAGGTCACTCTGCTCTTGCGGTGACCGAGCGATTGCTGAT
GGAAGCCTTCTCGATTTCTTGAGGCAAGTCTCCACCTTCGGACTCTCACT
TGTCAGGCTTGATATCAGGCAAGAGTCTGATCGTCATACTGATGTCATAG
ATGCCATCACCAAGCACCTGGAAATTGGTTCCTACCGAGAATGGTCTGAA
GAAAAGAGGCAGGAATGGCTTTTATCTGAACTCAGTGGCAAGCGTCCACT
GTTTGGCCCTGACCTTCCTAAAACTGAAGAAATTGCTGATGTTTTGGAGA
CATTTCATGTCATAGCTGAACTTCCAGCTGATAATTTTGGAGCATACATC
ATATCGATGGCAACAGCACCATCTGATGTGCTGGCTGTTGAACTCCTACA
GCGTGAATGCCATGTGAAACAACCACTTAGAGTTGTTCCACTTTTTGAGA
AGCTTGCAGATTTGGAGGCAGCACCTGCTGCTCTGGCCCGACTCTTTTCA
GTCGATTGGTACAGGAATCGGATCAATGGTAAGCAAGAAGTCATGATTGG
GTACTCAGATTCTGGTAAAGATGCTGGGCGATTCTCGGCTGCCTGGCAGT
TATACAAGGCTCAAGAGGAGCTTATAAAGGTAGCAAAGCAATATGGTATA
AAACTAACCATGTTCCATGGTCGTGGTGGAACTGTTGGAAGAGGAGGTGG
TCCCACCCATCTTGCCATATTGTCTCAACCACCAGATACAATTCATGGCT
CACTGCGTGTTACTGTTTCAGGTGAAGTTATTGAGCAATCATTTG
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