FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_PICST (Mitogen-activated protein kinase HOG1 OS=Pichia stipitis GN=HOG1 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A    TG+ VA+KK        VL  R Y  REL+L++ + H N+I+L   F S   +D  F+N   E     ++R+L       Q     +++ +TYQI RGL YIH+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSAVDKLTGQNVAVKKIMKPFSTSVLAKRTY--RELKLLKHLKHENLITLDDIFLSPL-EDIYFVN---ELQGTDLHRLLTSRPLEKQ-----FIQYFTYQILRGLKYIHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_GLOLA (Mitogen-activated protein kinase HOG1 OS=Glomerella lagenarium GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSARDQLTNQNVAVKKIMKPFSTPVLAKRTY--RELKLLKHLRHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_CRYPA (Mitogen-activated protein kinase HOG1 OS=Cryphonectria parasitica GN=HOG1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VAIKK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_COCIM (Mitogen-activated protein kinase HOG1 OS=Coccidioides immitis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 52/146 (35.62%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   17 TTRYTDLQPVGMGAFGLVCSARDQLTNQAVAVKKIMKPFSTPVLAKRTY--RELKLLKHLRHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILIN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_BEABA (Mitogen-activated protein kinase HOG1 OS=Beauveria bassiana GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSARDQLTNQNVAVKKIMKPFSTPVLAKRTY--RELKLLKHLRHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 47/135 (34.81%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++GIV++AK  ETGE VA+K++  D   +       RE+ L++ + HPN++ L H    T  K    L LV EY+ + +    K+       +    +K + YQ+ +G+A+ H    V HRD+KPQNLL++
Sbjct:   10 LGEGTYGIVYKAKNRETGEIVALKRIRLDSEDEGVPCTAIREISLLKELKHPNIVRL-HDVIHTERK----LTLVFEYLDQDL---KKYLDECGGEISKPTIKSFMYQLLKGVAFCHD-HRVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSS-----MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            +G G++G+V++A+   T ET+A+KK+  ++  +       RE+ L++ M H N++ L+    S     E  L LV EY+      + KH  S      + RM    +K + YQI RG+AY H+   V HRD+KPQNLL+D  T+ L
Sbjct:   10 IGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRLYLVFEYLD---LDLKKHMDSCPDFAKDPRM----IKRFLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRQTNAL 142          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_USTMA (Mitogen-activated protein kinase HOG1 OS=Ustilago maydis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y+  + VG G+FG+V  A    T  +VAIKK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TTRYVDLQPVGMGAFGLVCSANDQLTSTSVAIKKIMKPFSTPVLSKRTY--RELKLLKHIRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL 749
            +G G++G+V++A+   TG+ VA+KK+  D   +       RE+ L++ + HPN+I L           E  L +V E++ + + R +   SS    +PL  VK Y  Q+  G+++ H+   V HRD+KPQNLL+D L
Sbjct:   10 IGEGTYGVVYKARNKVTGQLVALKKIRLDLEAEGVPSTAVREISLLKELKHPNIIKLLDVVHR-----EKKLYMVFEFLTQDLKRHMD--SSPTSELPLPVVKSYLAQLLEGVSFCHS-HRVIHRDLKPQNLLLDGL 138          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13
Identity = 49/135 (36.30%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++GIV  A   ET E VAIKK+        D +   RE++L+R MDH N+++++        + E F ++ + Y  E M   L      NQ +   + + + YQI RGL YIH+   V HRD+KP NLL++
Sbjct:   66 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDII--PPPQREAFNDVYIAY--ELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLN 195          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
HOG1_PICST2.798e-1338.69Mitogen-activated protein kinase HOG1 OS=Pichia st... [more]
HOG1_GLOLA2.798e-1336.30Mitogen-activated protein kinase HOG1 OS=Glomerell... [more]
HOG1_CRYPA2.798e-1336.30Mitogen-activated protein kinase HOG1 OS=Cryphonec... [more]
HOG1_COCIM2.798e-1335.62Mitogen-activated protein kinase HOG1 OS=Coccidioi... [more]
HOG1_BEABA2.798e-1336.30Mitogen-activated protein kinase HOG1 OS=Beauveria... [more]
CDK5_DICDI2.798e-1334.81Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDC2_CHERU2.798e-1335.62Cell division control protein 2 homolog OS=Chenopo... [more]
HOG1_USTMA3.655e-1336.30Mitogen-activated protein kinase HOG1 OS=Ustilago ... [more]
CDK3_MOUSE3.655e-1334.31Cell division protein kinase 3 OS=Mus musculus GN=... [more]
NTF4_TOBAC4.773e-1336.30Mitogen-activated protein kinase homolog NTF4 OS=N... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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