FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKF4_ORYSJ (Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 48/135 (35.56%), Postives = 78/135 (57.78%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            VG G+FG V++A   + GE VA+KK+   R+Y +       RE++ +R M+HPN++ LK        ++   L  +MEY+   +Y+++K      +      V+ + +QIF+ LAY+H   G  HRD+KP+NLLV
Sbjct:   10 VGDGTFGSVWRAINKQNGEVVAVKKM--KRKYYSFEECMSLREVKSLRRMNHPNIVKLKEVI-----RENDILYFIMEYMECNLYQLMK---DRVKPFSEAEVRNWCFQIFQALAYMHQ-RGYFHRDLKPENLLV 133          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM-PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            +G G++G+V++A+   T ET+A+KK+  ++  +       RE+ L++ M H N++ L+    S     E  L LV EY+      + KH  S  + +     VK++ YQI  G+AY H+   V HRD+KPQNLL+D  T+ L
Sbjct:   10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHS-----EKRLYLVFEYLD---LDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHS-HRVLHRDLKPQNLLIDRRTNSL 142          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y+    +G G++G+V++ +   TG+ VA+KK+  +   +       RE+ L++ + HPNV+ L           E  L LV E++   + + L    S  Q M  + VK Y YQI  G+ + H    V HRD+KPQNLL+D
Sbjct:    4 YLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKELQHPNVVRLLDVLM-----QESKLYLVFEFLSMDLKKYLDSIPS-GQFMDPMLVKSYLYQILEGILFCH-CRRVLHRDLKPQNLLID 137          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: WIN1_SCHPO (MAP kinase kinase kinase win1 OS=Schizosaccharomyces pombe GN=win1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 47/146 (32.19%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR--------ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            TI +    ++G+GSFG V++A  L+TG+ +A+K+V   +   +R        E+ ++ L DHPNV+S    ++      E  +N+ ME    +       Y  +      + +++Y  Q+  GLAYIH+  GV H+DVKP+N+L D
Sbjct: 1117 TIRWQQGGLIGSGSFGTVYRAVNLDTGDLMAVKEVALHKPRISRPMIKRIKGEMLVLELFDHPNVVS----YYGIEVHREK-VNIFMELCQGSSLFEFLRYGRIEDE---LVIQVYVLQLLEGLAYIHSC-GVSHQDVKPENILFD 1253          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 46/137 (33.58%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  351 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            R +G G+ GIV  A   ETGE VAIKK+      + D +   RE++L++ MDH NVI++          +   +++V E +   ++ +++     NQ +   + + + YQ+ RGL Y+H+   V HRD+KP NLL++
Sbjct:   44 RPIGRGASGIVCAAWNSETGEEVAIKKIGNAFGNIIDAKRTLREIKLLKHMDHDNVIAIIDIIRPPQPDNFNDVHIVYELMDTDLHHIIR----SNQPLTDDHSRFFLYQLLRGLKYVHSA-NVLHRDLKPSNLLLN 175          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_EURHE (Mitogen-activated protein kinase hog1 OS=Eurotium herbariorum GN=hog1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   TG  VA+KK        VL  R Y  REL+L++ + H N+I L   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   17 TSRYTELQPVGMGAFGLVCAARDQLTGAPVAVKKIMKPFSTPVLSKRTY--RELKLLKHLGHENIICLSDIFISPLED----IYSVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILIN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKD1_ARATH (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 3
Query:  318 EPKQTIS-YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 746
            +PK+    Y+   V+G G++G+VF+A   + GETVAIKK+   +  +       RE++L++ + HP++I L   F    +     L++V E++   +  V++     N  +    VK Y   I +GL Y H    V HRD+KP NLL+ P
Sbjct:    3 QPKKVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKELKHPHIIELIDAFPHKEN-----LHIVFEFMETDLEAVIR---DRNLYLSPGDVKSYLQMILKGLEYCHG-KWVLHRDMKPNNLLIGP 143          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_VIGUN (Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM-PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            +G G++G+V++A+   T ET+A+KK+  ++  +       RE+ L++ M H N++ L+    S     E  L LV EY+      + KH  S  + +     VK++ YQI  G+AY H+   V HRD+KPQNLL+D  T+ L
Sbjct:   10 IGEGTYGVVYKARDRVTDETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHS-----EKRLYLVFEYLD---LDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHS-HRVLHRDLKPQNLLIDRRTNSL 142          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 46/135 (34.07%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++A+   T ET+A+KK+  ++  +       RE+ L++ M H N++ L+    S     E  L LV EY+   + + +   SS         +K++ YQI  G+AY H+   V HRD+KPQNLL+D
Sbjct:   10 IGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHS-----EKRLYLVFEYLDLDLKKFMD--SSPEFAKDQRQIKMFLYQILCGIAYCHS-HRVLHRDLKPQNLLID 136          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPKC_ASPTN (Mitogen-activated protein kinase mpkC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mpkC PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            TI Y   R VG G+FG+V  A    T ++VAIKK++         +   RE++L++ + H N+I L   F S        + LV E +   + R+L+     N+     + + + YQ+ RGL YIH+  GV HRD+KP NLL++
Sbjct:   16 TIRYANVRPVGLGAFGLVCSAYDQITQQSVAIKKMMSPFASSAIAKRTYREVKLLKKLRHENLIGLCDIFISPLED----IYLVTELLGTDLSRLLRSKPLENK-----FAQFFMYQLMRGLKYIHSA-GVIHRDLKPSNLLIN 149          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CDKF4_ORYSJ8.142e-1335.56Cyclin-dependent kinase F-4 OS=Oryza sativa subsp.... [more]
CDC2_VIGAC8.142e-1335.21Cell division control protein 2 homolog OS=Vigna a... [more]
CDC2_CARAU8.142e-1333.33Cell division control protein 2 homolog OS=Carassi... [more]
WIN1_SCHPO1.063e-1232.19MAP kinase kinase kinase win1 OS=Schizosaccharomyc... [more]
MPK11_ARATH1.063e-1233.58Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
HOG1_EURHE1.063e-1234.93Mitogen-activated protein kinase hog1 OS=Eurotium ... [more]
CDKD1_ARATH1.063e-1232.67Cyclin-dependent kinase D-1 OS=Arabidopsis thalian... [more]
CDC2_VIGUN1.063e-1235.21Cell division control protein 2 homolog OS=Vigna u... [more]
CDC22_MEDSA1.063e-1234.07Cell division control protein 2 homolog 2 OS=Medic... [more]
MPKC_ASPTN1.389e-1234.72Mitogen-activated protein kinase mpkC OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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