FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_DEBHA (Mitogen-activated protein kinase HOG1 OS=Debaryomyces hansenii GN=HOG1 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A    TG+ VA+KK        VL  R Y  REL+L++ + H N+I+L   F S        +  V E     ++R+L       Q     +++ +TYQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSAIDKLTGQNVAVKKIMKPFSTSVLAKRTY--RELKLLKHLRHENLITLDDIFLSPLED----IYFVTELQGTDLHRLLTSRPLEKQ-----FIQYFTYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: ERK1_DICDI (Extracellular signal-regulated kinase 1 OS=Dictyostelium discoideum GN=erkA PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 45/141 (31.91%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y   + +G G++G+V  AK   TGE VAIKK+      L+D +   RE+ L+R   H N+IS+K      + +    + +V E +   +++++    +  Q +   + + + YQ+ RGL +IH+   V HRD+KP NLL++
Sbjct:  149 YSIVKCIGHGAYGVVCSAKDNLTGEKVAIKKISKAFDNLKDTKRTLREIHLLRHFKHENLISIKDILKPNSKEQFEDVYIVSELMDTDLHQII----TSPQPLSDDHCQYFVYQMLRGLKHIHSA-NVLHRDLKPSNLLIN 284          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y+    +G G++G+V++ +   TG+ VA+KK+  +   +       RE+ L++ + HPN++SL+      +      L L+ E++   + + L       Q M    VK Y YQI +G+ + H+   V HRD+KPQNLL+D
Sbjct:    4 YIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSR-----LYLIFEFLSMDLKKYLDSIPP-GQFMDSSLVKSYLYQILQGIVFCHS-RRVLHRDLKPQNLLID 137          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 43/135 (31.85%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++ +   TG+ VA+KK+  +   +       RE+ L++ + HPN++SL+      +      L L+ E++   + + L       Q M    VK Y YQI +G+ + H+   V HRD+KPQNLL+D
Sbjct:   10 IGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSR-----LYLIFEFLSMDLKKYLDSIPP-GQYMDSSLVKSYLYQILQGIVFCHS-RRVLHRDLKPQNLLID 137          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_SETTU (Mitogen-activated protein kinase HOG1 OS=Setosphaeria turcica GN=HOG1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  366 GSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            G+FG+V  AK   T + VA+KK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL YIH+  GV HRD+KP N+LV+
Sbjct:    2 GAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYIHSA-GVVHRDLKPSNILVN 123          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 43/135 (31.85%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++ +   TG+ VA+KK+  +   +       RE+ L++ + HPN++SL+      +      L L+ E++   + + L       Q M    VK Y YQI +G+ + H+   V HRD+KPQNLL+D
Sbjct:   10 IGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSR-----LYLIFEFLSMDLKKYLDSIPP-GQFMDSSLVKSYLYQILQGIVFCHS-RRVLHRDLKPQNLLID 137          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK12_MOUSE (Mitogen-activated protein kinase 12 OS=Mus musculus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12
Identity = 50/142 (35.21%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y   + VG+G++G V  A    TG  VAIKK+ +        +   REL+L++ M H NVI L   F    S D+     LVM ++   + +++KH +    R     ++   YQ+ +GL YIH   GV HRD+KP NL V+
Sbjct:   27 YQDLQPVGSGAYGAVCSAVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDESLDDFTDFYLVMPFMGTDLGKLMKHETLSEDR-----IQFLVYQMLKGLKYIHAA-GVIHRDLKPGNLAVN 162          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK07_RAT (Mitogen-activated protein kinase 7 OS=Rattus norvegicus GN=Mapk7 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12
Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y     +G G++G+V  A+   TG+ VAIKK      V+ + +   REL++++   H N+I++K     T    E   + +V++ +   +++++      +Q + L +V+ + YQ+ RGL Y+H+   V HRD+KP NLLV+
Sbjct:   55 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFRSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVN 191          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK07_MOUSE (Mitogen-activated protein kinase 7 OS=Mus musculus GN=Mapk7 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12
Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y     +G G++G+V  A+   TG+ VAIKK      V+ + +   REL++++   H N+I++K     T    E   + +V++ +   +++++      +Q + L +V+ + YQ+ RGL Y+H+   V HRD+KP NLLV+
Sbjct:   55 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILKPTVPYGEFRSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVN 191          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK07_HUMAN (Mitogen-activated protein kinase 7 OS=Homo sapiens GN=MAPK7 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12
Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y     +G G++G+V  A+   TG+ VAIKK      V+ + +   REL++++   H N+I++K     T    E   + +V++ +   +++++      +Q + L +V+ + YQ+ RGL Y+H+   V HRD+KP NLLV+
Sbjct:   55 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVN 191          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
HOG1_DEBHA1.389e-1236.50Mitogen-activated protein kinase HOG1 OS=Debaryomy... [more]
ERK1_DICDI1.389e-1231.91Extracellular signal-regulated kinase 1 OS=Dictyos... [more]
CDC2_RAT1.389e-1231.21Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_HUMAN1.389e-1231.85Cell division control protein 2 homolog OS=Homo sa... [more]
HOG1_SETTU1.814e-1237.31Mitogen-activated protein kinase HOG1 OS=Setosphae... [more]
CDC2_BOVIN1.814e-1231.85Cell division control protein 2 homolog OS=Bos tau... [more]
MK12_MOUSE2.369e-1235.21Mitogen-activated protein kinase 12 OS=Mus musculu... [more]
MK07_RAT2.369e-1230.99Mitogen-activated protein kinase 7 OS=Rattus norve... [more]
MK07_MOUSE2.369e-1230.99Mitogen-activated protein kinase 7 OS=Mus musculus... [more]
MK07_HUMAN2.369e-1230.99Mitogen-activated protein kinase 7 OS=Homo sapiens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
back to top