FC873743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 288 ISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPN-VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761 ++TT G GE + Y VG G++G V++A+ TG VA+KK + RE+ L+R++ + V+ L + + L LV EY+ + + ++ + Q++P+ VK+ YQ+ +G+A+ H GV HRD+KP NLL+D T L Sbjct: 13 VTTTTDG--GELRAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHG-RGVLHRDLKPHNLLMDRKTMAL 174
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 43/134 (32.09%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740 +G GS+G+VF+ + +TG+ VAIKK L+ ++ RE+++++ + HPN+++L F + + L+LV EY T+ L Y + +P VK T+Q + + + H HRDVKP+N+L+ Sbjct: 10 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHK-HNCIHRDVKPENILI 134
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKD3_ARATH (Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 47/148 (31.76%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 318 EPKQTIS-YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740 +PK+ Y+ + V+G G++G+VF+A +T +TVAIKK+ ++ + RE+++++ + HP++I L F + L+LV E++ + V++ N + +K Y F+GLAY H V HRD+KP NLL+ Sbjct: 4 QPKKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELKHPHIILLIDAFPHKEN-----LHLVFEFMETDLEAVIR---DSNIFLSPADIKSYLLMTFKGLAYCHD-KWVLHRDMKPNNLLI 142
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++G+V++ TG+ VA+KK+ + + RE+ L++ + HPN++ C +D L L+ E++ + + L S Q + + VK Y YQI +G+ + H V HRD+KPQNLL+D Sbjct: 10 IGEGTYGVVYKGVHKATGQIVAMKKIRLENEEEGVPSTAIREISLLKELQHPNIV----CLLDVLMQDSR-LYLIFEFLSMDLKKYLDSIPS-GQYLEAMLVKSYLYQILQGIIFCHA-RRVLHRDLKPQNLLID 137
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 369 SFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 ++G+V++A+ +ET E +A+KK+ ++ + RE+ L++ M H N+++LK E L LV EY+ + + + +Q + + VK++ QI RG+AY H+ V HRD+KPQNLL+D Sbjct: 1 AYGVVYKARDIETNEDIALKKIRLEQEDEGVPSTAIREISLLKEMHHENIVNLKDVVHR-----EKRLYLVFEYLDLDLKKHMDSCPEFSQDLHM--VKMFLCQILRGVAYCHS-HRVLHRDLKPQNLLID 123
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++GIV ET E VAIKK+ D + RE++L+R +DH N+I ++ + F ++ + E M L H NQ + + + + YQI RGL YIH+ V HRD+KP NLL++ Sbjct: 42 IGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVI--PPPIPQAFNDVYI--ATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLN 171
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++GIV ET E VAIKK+ D + RE++L+R +DH N+I ++ + F ++ + E M L H NQ + + + + YQI RGL YIH+ V HRD+KP NLL++ Sbjct: 42 IGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVI--PPPIPQAFNDVYI--ATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLN 171
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 46/141 (32.62%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 Y+ + +G G++GIV + T E VAIKK+ D REL+L+R + H NVI+LK + + LV E + +++++K +Q + + + + +Q+ RGL Y+H+ G+ HRD+KP NLLV+ Sbjct: 32 YVPIKPIGRGAYGIVCSSINRATNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIK----SSQPLSNDHCQYFLFQLLRGLKYLHSA-GILHRDLKPGNLLVN 167
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 351 RVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 R VG G+ GI+ +T + VAIKK+ D + RE++L+R MDH NVIS+K + E F ++ + Y E M L H NQ + + + + YQ+ RGL Y+H+ V HRD++P NLL++ Sbjct: 65 RPVGRGACGIICAVVNAQTRQEVAIKKIGNAFDNQIDAKRTLREIKLLRHMDHDNVISIKDII--RPPRRENFNDVYIVY--ELMDTDLHHLLRSNQPLTDDHCQYFLYQVLRGLKYVHSA-NVLHRDLRPSNLLLN 196
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 47/143 (32.87%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 YM + +G G++G+V + +T E VAIKK+ Y+N REL+L+R + H NVI+LK + LV E + +++++K +Q + + + + +Q+ RGL YIH+ + HRD+KP NLLV+ Sbjct: 32 YMPIKPIGRGAYGVVCSSVNSDTNEKVAIKKI--HNVYENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHKMSFKDVYLVYELMDTDLHQIIK----SSQVLSNDHCQYFLFQLLRGLKYIHSA-NILHRDLKPGNLLVN 167 The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 247
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bpback to top |