FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 50/180 (27.78%), Postives = 92/180 (51.11%), Query Frame = 3
Query:  267 DAVTGHIISTTIGGKNGEP--------KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            D +T  I  + +  K+  P        K  I +   +++G G+FG V+    L++GE +A+K+VL      ++            E++L++ + HPN++     +  T  +DE  LN+++E+VP  ++  +L+ + +     P   V+ YT Q+  GL Y+H    + HRD+K  N+LVD
Sbjct:   36 DKITSCIRKSMVFAKSQSPPNNSTVQIKPPIRWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVR----YLGTVREDET-LNILLEFVPGGSISSLLEKFGA----FPESVVRTYTNQLLLGLEYLHN-HAIMHRDIKGANILVD 205          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 46/135 (34.07%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G VF+AK  +T E VA+K+V  D   +       RE+ L++ + H N++ L     S        L LV E+  + +    K++ S N  +    VK + YQ+ +GLA+ H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFMYQLLKGLAFCHS-RNVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 42/135 (31.11%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++ +   TG+ VA+KK+  +   +       RE+ L++ + HPN++ L+          +  L L+ E++   + + L    S  Q +    VK Y YQI +G+ + H+   V HRD+KPQNLL+D
Sbjct:   10 IGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELHHPNIVCLQDVLM-----QDARLYLIFEFLSMDLKKYLDTIPS-GQYLDRSRVKSYLYQILQGIVFCHS-RRVLHRDLKPQNLLID 137          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 45/141 (31.91%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y+  + +G G++GIV  +   ET E VAIKK+        D     REL+L+R + H NVI+LK        +    + LV E +   +++++K    ++      + + + +Q+ RGL Y+H+   + HRD+KP NLLV+
Sbjct:   32 YVPIKPIGRGAYGIVCSSINRETNEKVAIKKIHNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSPQGLSND----HCQYFLFQLLRGLKYLHSAE-ILHRDLKPGNLLVN 167          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 47/137 (34.31%), Postives = 75/137 (54.74%), Query Frame = 3
Query:  351 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            R +G G+ GIV  A    TGE VAIKK+      + D +   RE++L+R MDH NVI++K        + ++F ++ + Y  E M   L+     NQ +     +   YQ+ RGL Y+H+   + HRD++P N+L++
Sbjct:   45 RPIGRGACGIVCAAVNSVTGEKVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENVITIKD--IVRPPQRDIFNDVYIVY--ELMDTDLQRILRSNQTLTSDQCRFLVYQLLRGLKYVHSA-NILHRDLRPSNVLLN 176          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG2_ZYGRO (Mitogen-activated protein kinase HOG2 OS=Zygosaccharomyces rouxii GN=HOG2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A     G+ VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSATDTLVGQPVAIKKIMKPFSTAVLAKRTY--RELKLLKHLRHENLICLQDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRO (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A     G+ VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSATDTLAGQPVAIKKIMKPFSTAVLAKRTY--RELKLLKHLRHENLICLQDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRC (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=HOG1 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A     G+ VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSATDTLAGQPVAIKKIMKPFSTAVLAKRTY--RELKLLKHLRHENLICLQDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDH-PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            VG G++G V++A+   TG  VA+KK       +       RE+ ++R++   P+++ L         + +  L LV EYV   + + ++ +    Q +P   VK   YQ+ +G+A+ H   GV HRD+KP NLL+D  T  L
Sbjct:   22 VGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQNIPQNTVKCLMYQLCKGMAFCHG-HGVLHRDLKPHNLLMDRKTMTL 162          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKL1_RAT (Cyclin-dependent kinase-like 1 OS=Rattus norvegicus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 43/134 (32.09%), Postives = 75/134 (55.97%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            +G GS+G+VF+ +  +TG+ VAIK+ L+       ++   RE+++++ + HPN++SL   F     + +  L+LV EY   T+   L  Y    + +P   VK  T+Q  + + + H      HRDVKP+N+L+
Sbjct:   10 IGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVSLLEVF-----RRKRRLHLVFEYCHHTVLHELDRY---QRGVPEPLVKNITWQTLQAVNFCHK-HNCIHRDVKPENILI 134          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
M3K2_ARATH5.278e-1227.78Mitogen-activated protein kinase kinase kinase 2 O... [more]
CDK5_XENLA5.278e-1234.07Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDC2_CHICK5.278e-1231.11Cell division control protein 2 homolog OS=Gallus ... [more]
MPK3_ORYSJ6.893e-1231.91Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]
MPK12_ARATH6.893e-1234.31Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
HOG2_ZYGRO6.893e-1236.50Mitogen-activated protein kinase HOG2 OS=Zygosacch... [more]
HOG1_ZYGRO6.893e-1236.50Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_ZYGRC6.893e-1236.50Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
CKB22_ARATH6.893e-1231.69Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDKL1_RAT6.893e-1232.09Cyclin-dependent kinase-like 1 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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