FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 43/141 (30.50%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y+    +G G++G+V++ +   TG+ VA+KK+  +   +       RE+ L++ + HPN++SL+      +      L L+ E++   + + L       Q M    VK Y +QI +G+ + H+   V HRD+KPQNLL+D
Sbjct:    4 YIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSR-----LYLIFEFLSMDLKKYLDSIPP-GQFMDSSLVKSYLHQILQGIVFCHS-RRVLHRDLKPQNLLID 137          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: PMK1_CAEEL (Mitogen-activated protein kinase pmk-1 OS=Caenorhabditis elegans GN=pmk-1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTS----KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +GTG++G V  A+C  +G  VAIKK       ++  RR   REL+L+R M H N+I L   F    +    +D  F++++M      + ++        QR+   +++   YQI RGL YIH+   + HRD+KP N+ V+
Sbjct:   41 IGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARR-TYRELRLLRCMCHENIIDLLDVFTPNENVNDIEDVYFVSMLMGADLSNILKI--------QRLNDDHIQFLVYQILRGLKYIHSA-DIIHRDLKPSNIAVN 170          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 39/135 (28.89%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVL------QDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++GIV      ET E VA+KK+        D +   RE++L+R +DH N+I+++        +    + +  E +   ++++++   S+++     + + + YQ+ RGL YIH+   + HRD+KP NLL++
Sbjct:   44 IGRGAYGIVCSVLDTETNELVAMKKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEE----HCQYFLYQLLRGLKYIHSA-NIIHRDLKPSNLLLN 173          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++GIV  A   ET E VAIKK+        D +   RE++L+  MDH NVI +K        +    + +V E +   ++++++   ++       + + + YQI RGL YIH+   V HRD+KP NL+++
Sbjct:   39 IGRGAYGIVCCATNSETNEEVAIKKIANAFDNRVDAKRTLREIKLLSHMDHDNVIKIKDIIELPEKERFEDVYIVYELMDTDLHQIIRSTQTLTDD----HCQYFLYQILRGLKYIHSA-NVLHRDLKPSNLVLN 168          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_YEAST (Mitogen-activated protein kinase HOG1 OS=Saccharomyces cerevisiae GN=HOG1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A    T + VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSATDTLTSQPVAIKKIMKPFSTAVLAKRTY--RELKLLKHLRHENLICLQDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A    T + VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   28 VGMGAFGLVCSATDTLTSQPVAIKKIMKPFSTSVLAKRTY--RELKLLKHLRHENLICLEDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 152          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 43/135 (31.85%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++ K   T   VA+KK+  +   +       RE+ L++ + HPNV+ L+        ++ LFL  + E++   + R +      ++ +PL  +K YT+QI + + + H    V HRD+KPQNLLVD
Sbjct:   28 IGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQ---ENRLFL--IFEFLSFDLKRYMDQLGK-DEYLPLETLKSYTFQILQAMCFCHQ-RRVIHRDLKPQNLLVD 155          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 44/150 (29.33%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  333 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            IS+   +++G G+FG V+    L++GE +A+K+VL    + ++            E++L++ + HPN++     +  T  +D+  LN+++E+VP  ++  +L+ +       P   V+ YT Q+  GL Y+H    + HRD+K  N+LVD
Sbjct:   67 ISWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQELEEEVKLLKNLSHPNIVR----YLGTVREDDT-LNILLEFVPGGSISSLLEKFGP----FPESVVRTYTRQLLLGLEYLHN-HAIMHRDIKGANILVD 206          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 42/149 (28.19%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  333 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKK-----VLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            I +   +++G G +G V+     +TGE  A+K+     +  D + KN      +E+++MR + H N++      +  TS D+ FL++ +EY+P  ++  +L  + + ++ +    +K+YT QI +GL+++H    + HRD+K  N+L+D
Sbjct:  168 IKWQKGQILGRGGYGSVYLGLNKDTGELFAVKQLEIVDINSDPKLKNMILSFSKEIEVMRSLRHDNIVR-----YLGTSLDQSFLSVFLEYIPGGSISSLLGKFGAFSENV----IKVYTKQILQGLSFLH-ANSIIHRDIKGANILID 306          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_CANGA (Mitogen-activated protein kinase HOG1 OS=Candida glabrata GN=HOG1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A    T + VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSATDTLTNQQVAIKKIMKPFATAVLAKRTY--RELKLLKHLRHENLICLQDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFHYQILRGLKYVHSA-GVVHRDLKPSNILIN 153          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CDC2_MOUSE6.893e-1230.50Cell division control protein 2 homolog OS=Mus mus... [more]
PMK1_CAEEL9.002e-1233.57Mitogen-activated protein kinase pmk-1 OS=Caenorha... [more]
MPK3_ARATH9.002e-1228.89Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK13_ARATH9.002e-1232.59Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
HOG1_YEAST9.002e-1236.50Mitogen-activated protein kinase HOG1 OS=Saccharom... [more]
HOG1_KLULA9.002e-1236.50Mitogen-activated protein kinase HOG1 OS=Kluyverom... [more]
CDC2_CAEEL9.002e-1231.85Cell division control protein 2 homolog OS=Caenorh... [more]
ANP1_ARATH9.002e-1229.33Mitogen-activated protein kinase kinase kinase ANP... [more]
MKKA_DICDI1.176e-1128.19Mitogen-activated protein kinase kinase kinase A O... [more]
HOG1_CANGA1.176e-1136.50Mitogen-activated protein kinase HOG1 OS=Candida g... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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