FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CIPKC_ORYSJ (CBL-interacting protein kinase 12 OS=Oryza sativa subsp. japonica GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y   RV+G GSF  V+QA+ LET E VAIK + +++  K        RE+ ++R + HPN++ L   F    SK +++   VMEYV   E   RV K       R+     + Y  Q+   + + H   GV HRD+KP+NLLVD
Sbjct:   46 YELGRVLGQGSFAKVYQARHLETDECVAIKVLDKEKAVKGGMVHLVKREINVLRRVRHPNIVQL---FEVMASKTKIY--FVMEYVRGGELFSRVSK------GRLREDTARRYFQQLVSAVDFCH-ARGVFHRDLKPENLLVD 177          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 42/134 (31.34%), Postives = 75/134 (55.97%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            +G GS+G+VF+ +  +TG+ VAIK+ L+       ++   RE+++++ + HPN+++L   F     + +  L+LV EY   T+   L  Y    + +P   VK  T+Q  + + + H      HRDVKP+N+L+
Sbjct:   10 IGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRRLHLVFEYCDHTVLHELDRY---QRGVPEPLVKNITWQTLQAVNFCHK-HNCIHRDVKPENILI 134          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: PMK2_CAEEL (Mitogen-activated protein kinase pmk-2 OS=Caenorhabditis elegans GN=pmk-2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y + + +G G++G+V  A+   TG+ VAIKK  +        +   REL+L+R + H NV+ +   F  T   D   LN V  +V   M   L++   + QR+    ++L  YQ+ RGL YIH+  G+ HRD+KP N+ V+
Sbjct:   49 YNSLKPLGEGAYGVVCTAEYEPTGDRVAIKKFFRPFQSTIHAKRTYRELKLLRTLQHDNVLEMIDVF--TPDPDASSLNNVY-FVSVLMGSDLQNIMKI-QRLTDEQIQLLIYQVLRGLKYIHSA-GIIHRDLKPSNIAVN 184          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  291 STTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            ST  G  +G   +   Y   R +G G+F  V  A+ +E G+ VAIK + +++  KN       RE+  M+L+ HPNVI +   F    SK +++   V+E+V  T   +    SS N R+     + Y  Q+   + Y H+  GV HRD+KP+NLL+D
Sbjct:   15 STPSGSSSGGRTRVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLIKHPNVIRM---FEVMASKTKIY--FVLEFV--TGGELFDKISS-NGRLKEDEARKYFQQLINAVDYCHS-RGVYHRDLKPENLLLD 163          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 52/188 (27.66%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  219 DMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLM-RLMDHPNV----ISLKHCF-----FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            D+DSD  +S+   +  +++  +          GEP +   Y+  R +G G F  V+ AK +     VA+K V  D+ Y      E++L+ R+ D  N     +   H       F+    + + + +V E + E +  ++K Y   ++ +PLIYVK  + Q+  GL Y+H   G+ H D+KP+N+L++
Sbjct:  118 DLDSDSSISSCDERNEESLKDYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 303          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPKC_EMENI (Mitogen-activated protein kinase mpkC OS=Emericella nidulans GN=mpkC PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+ G+V  A  L + + VAIKK+++         R Y  RE++L+R + H N+I++   F S        + LV E +   ++R+L       + +   + + +TYQI RGL YIH+  GV HRD+KP NLL++
Sbjct:   17 TSRYANLQPVGLGTAGVVCSAYDLISEQVVAIKKMMKPFHSTSVAKRTY--REVKLLRHLRHDNLINMSDIFISPLED----VYLVTELLGTDLHRLLN-----GKPLESKFAQYFTYQILRGLKYIHSA-GVIHRDLKPGNLLIN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G VF+AK  ET E VA+K+V  D   +       RE+ L++ + H N++ L     S        L LV E+  + +    K++ S N  +    VK + +Q+ +GL + H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G VF+AK  ET E VA+K+V  D   +       RE+ L++ + H N++ L     S        L LV E+  + +    K++ S N  +    VK + +Q+ +GL + H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 45/135 (33.33%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G VF+AK  ET E VA+K+V  D   +       RE+ L++ + H N++ L     S        L LV E+  + +    K++ S N  +    VK + +Q+ +GL + H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: Y8078_DICDI (Probable serine/threonine-protein kinase DDB_G0268078 OS=Dictyostelium discoideum GN=DDB_G0268078 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 43/139 (30.94%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            Y   + VG G++G V +A  ++TGE VAIK++ +         + RE++ ++ + HPN++ L         +DELF   V EY+   +Y  +K  + +   +P   ++   YQI + L ++HT  G  HRD+KP+N+++
Sbjct:    4 YQFIKQVGDGAYGDVIKAIDVKTGEIVAIKRMKKKFSDWKECIQLREIKALKKLKHPNIVKLLEIIL---ERDELF--FVFEYLENNLYESIKDRTKL---LPETTIRNIIYQILQALHFMHT-NGFFHRDLKPENIML 133          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CIPKC_ORYSJ1.176e-1137.50CBL-interacting protein kinase 12 OS=Oryza sativa ... [more]
CDKL1_MOUSE1.176e-1131.34Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
PMK2_CAEEL1.536e-1134.75Mitogen-activated protein kinase pmk-2 OS=Caenorha... [more]
CIPKN_ARATH1.536e-1134.18CBL-interacting serine/threonine-protein kinase 23... [more]
SKY1_YEAST2.005e-1127.66Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
MPKC_EMENI2.005e-1134.25Mitogen-activated protein kinase mpkC OS=Emericell... [more]
CDK5_MOUSE2.005e-1133.33Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN2.005e-1133.33Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN2.005e-1133.33Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
Y8078_DICDI2.619e-1130.94Probable serine/threonine-protein kinase DDB_G0268... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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